DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spps and klf6b

DIOPT Version :10

Sequence 1:NP_001262902.1 Gene:Spps / 42882 FlyBaseID:FBgn0039169 Length:985 Species:Drosophila melanogaster
Sequence 2:XP_001920652.3 Gene:klf6b / 793760 ZFINID:ZDB-GENE-070912-633 Length:245 Species:Danio rerio


Alignment Length:206 Identity:76/206 - (36%)
Similarity:99/206 - (48%) Gaps:37/206 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   620 TPATTQPIPVSLPARSKVNAVTTS---STQITIAPTGGQVVSVTTQARGATASIRSTNTSTTTIT 681
            |.|...|...|:|.:.::.|...|   |.:..||.     ..|.|...|..||.:....:.|..:
Zfish    73 TEANLSPPGASIPRQDEIAASCHSSFGSCEKIIAS-----ADVHTHPLGHNASEQQCVIAHTPPS 132

  Fly   682 TPSQSHLNMNISVASVGGAATGGGGGTATGEPKPRLKRVACTCPNCTDGEKHSDKKRQHICHITG 746
            :||           .|...|.|           ||.:.|.|      :|.... ::|.|.|:..|
Zfish   133 SPS-----------LVKEDADG-----------PRGEEVRC------EGSPEG-RRRAHRCYFNG 168

  Fly   747 CHKVYGKTSHLRAHLRWHTGERPFVCSWAFCGKRFTRSDELQRHRRTHTGEKRFQCQECNKKFMR 811
            |.|||.|:|||:||.|.||||:|:.|||..|..||.|||||.||.|.|||.|.|:|..|::.|.|
Zfish   169 CRKVYTKSSHLKAHQRTHTGEKPYRCSWEGCEWRFARSDELTRHFRKHTGAKPFKCSHCDRCFSR 233

  Fly   812 SDHLSKHIKTH 822
            ||||:.|:|.|
Zfish   234 SDHLALHMKRH 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SppsNP_001262902.1 SP1-4_N <281..>371 CDD:425404
Atrophin-1 284..>630 CDD:460830 3/9 (33%)
SP1-4_N <713..741 CDD:425404 6/27 (22%)
C2H2 Zn finger 742..764 CDD:275368 13/21 (62%)
zf-H2C2_2 756..783 CDD:463886 16/26 (62%)
C2H2 Zn finger 772..794 CDD:275368 14/21 (67%)
zf-H2C2_2 786..809 CDD:463886 12/22 (55%)
zf-C2H2 800..822 CDD:395048 11/21 (52%)
C2H2 Zn finger 802..822 CDD:275368 10/19 (53%)
klf6bXP_001920652.3 None
Blue background indicates that the domain is not in the aligned region.

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