DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spps and sp9

DIOPT Version :9

Sequence 1:NP_001262902.1 Gene:Spps / 42882 FlyBaseID:FBgn0039169 Length:985 Species:Drosophila melanogaster
Sequence 2:NP_998125.2 Gene:sp9 / 405896 ZFINID:ZDB-GENE-040426-2313 Length:447 Species:Danio rerio


Alignment Length:287 Identity:117/287 - (40%)
Similarity:141/287 - (49%) Gaps:59/287 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   589 LHTESNSLSSLSIPASIQITALPQQATNTPNTPATTQPIPVSL----PARSKVNAVTTSSTQITI 649
            :||...|...:..||....::|..         .|.|.|...|    |..|.:.....|||  .|
Zfish   179 VHTNPGSWLEVQNPAGTLQSSLHS---------GTPQAIHSQLSGYNPDFSSLTHSAFSST--GI 232

  Fly   650 APTGGQVVSVT----TQARGATASIRSTNTSTTTITTPSQSHLNMNISVASVGGAATGGGGGTAT 710
            :||...::|.:    ||....|.....|:.|.|.               |.:.||::  |.||::
Zfish   233 SPTASHLLSTSQHLLTQEGFKTVIPTYTDASATN---------------AMISGASS--GIGTSS 280

  Fly   711 GEPKPRLKRVACTCPNCTDGEKHSD------KKRQHICHITGCHKVYGKTSHLRAHLRWHTGERP 769
            ...:....|..|.||||.:.|:...      :|..|.|||.||.|||||||||:|||||||||||
Zfish   281 RSSRRYSGRATCDCPNCQEAERLGPAGASLRRKGLHSCHIPGCGKVYGKTSHLKAHLRWHTGERP 345

  Fly   770 FVCSWAFCGKRFTRSDELQRHRRTHTGEKRFQCQECNKKFMRSDHLSKHIKTHFKSRSGVELIEL 834
            |||:|.|||||||||||||||.|||||||||.|..|||:||||||||||||||            
Zfish   346 FVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPVCNKRFMRSDHLSKHIKTH------------ 398

  Fly   835 SIKQETKGGNAPKSISTVNGIVTIEIP 861
                 |.||...|...:......:|.|
Zfish   399 -----TAGGGGKKGSDSDTDTSNLETP 420

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
SppsNP_001262902.1 COG5048 <725..827 CDD:227381 77/107 (72%)
C2H2 Zn finger 742..764 CDD:275368 18/21 (86%)
zf-H2C2_2 756..783 CDD:290200 23/26 (88%)
C2H2 Zn finger 772..794 CDD:275368 18/21 (86%)
zf-H2C2_2 786..809 CDD:290200 18/22 (82%)
zf-C2H2 800..822 CDD:278523 17/21 (81%)
C2H2 Zn finger 802..822 CDD:275368 16/19 (84%)