DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spps and dar1

DIOPT Version :9

Sequence 1:NP_001262902.1 Gene:Spps / 42882 FlyBaseID:FBgn0039169 Length:985 Species:Drosophila melanogaster
Sequence 2:NP_001097493.1 Gene:dar1 / 38436 FlyBaseID:FBgn0263239 Length:751 Species:Drosophila melanogaster


Alignment Length:787 Identity:212/787 - (26%)
Similarity:290/787 - (36%) Gaps:230/787 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 QVHQGTVQQQAQGTNASGANGSGVTNSGTAGQLPGSITIPGTNLQIPTSVAAANG-LLGNISNIS 252
            ::....|:.:.....|:.||.:..|:|             ..|....:|...:|| ...|.:|.|
  Fly    37 KIEPADVELEVLAAAAAAANNNNNTSS-------------NNNHSSNSSSNNSNGSQTPNGNNNS 88

  Fly   253 NLLGGG----------------------------QSIKLENGQLQMRPQLVQFPAPA----MP-- 283
            :|..||                            .|..|::|:..........|||:    :|  
  Fly    89 SLATGGHQHHQFHHHLHHHHSHQHHHQHHHLHQHHSHSLQSGESGASEAWPHLPAPSYASDVPHA 153

  Fly   284 QQQQTVAVQIPVQTANG----QTIYQTVHVPVQ-----AAATSSGGL-------------QNLMQ 326
            ||||......|...:||    ..:|......|.     |...|:||.             :..:.
  Fly   154 QQQQLQPAGSPNSNSNGAYGCAPLYDGAPYEVALGYGGAVVASTGGATSSDKEYLYETKNKEALY 218

  Fly   327 AQSLQMP----------SASQMQIIPQFSQIAQIVTPNG--------------------QIQQVQ 361
            |..|..|          :.|...|.|   :.|.:::.:|                    |:.||:
  Fly   219 ADPLDDPYQRPVLWDDITTSIQNIDP---ENALMLSSSGSSNNNGSSNSSSNTGESATSQLPQVK 280

  Fly   362 L---------AMPYPQLPPNANIIHIQNPHQQQQQQVQQQQQQQQAQQQQQAQQQQAQQQQQQQV 417
            :         ....|.|.|    :.|:...||:|||.|.||||||.|||||..|||.|||.|||.
  Fly   281 MEAIDESLLETFSTPLLSP----LEIKTEKQQRQQQHQHQQQQQQQQQQQQQHQQQHQQQYQQQH 341

  Fly   418 QAQH---QQLLQAISDASAGGQLPPNQPITITNAQGQQLTVIPAQLRPN-----APTAPTPAP-A 473
            ..||   |.|.|.....:..| |||  .:.:...|.||.......|:.|     :|...||.. :
  Fly   342 YQQHYQQQHLYQHHPSLALPG-LPP--AVDVVELQLQQQHQQQQHLQHNNSSSSSPKLATPGDNS 403

  Fly   474 GVPTPMQMPNLQALPIQNIPGLG-----------------QVQIIHAN-QL-PPNLPANFQQVLT 519
            |..:..|    |....|.:.|.|                 ..|..|.. |: ||:..|:.....|
  Fly   404 GNTSSYQ----QQYASQLVSGSGGGYLNGSSSNSYGYSWHSSQSFHTKYQIHPPSAAASATASAT 464

  Fly   520 QLPMSHPQVQTQGQVQVMPKQEPQSPTQMITSIKQEPPDTFGPISATGNPPAPASTPNTASPQQQ 584
            ..|.:....|.|.|      |:.|...|.:.                  |||..|||:|:     
  Fly   465 ATPTAQLGAQQQQQ------QQQQQQLQQLC------------------PPAAPSTPSTS----- 500

  Fly   585 QIKFLHTESNSLSSLSIPASIQITALPQQATNTPNTPATTQPIPVSLPARSKVNAVTTSSTQITI 649
                    |:|:||.|..::.:...:|      |.||.::.|   ..|..|.|.|...::.|...
  Fly   501 --------SSSISSSSASSASRHMFVP------PLTPPSSDP---GSPGSSMVAAAAAAAAQRRT 548

  Fly   650 AP----TGGQVVSV-----TTQARGATASIRSTNTSTTTITT-------------PSQSHLNMN- 691
            .|    ..|.|:.:     |.|..|..|: .|.|:.|||:||             |.|..:... 
  Fly   549 TPPPPYQQGHVMGLINPPPTLQLLGGAAT-GSNNSCTTTLTTLTPASAIQQQQQQPQQQQVPQQQ 612

  Fly   692 --ISVASVGGAATGGGG----GTATGEPKPRLKRVACTCPNCTDGEKHSDKKRQHICHITGCHKV 750
              .:..|.||...|...    |||.....  |..|.....|..:..: .:|:|.|.|...||.||
  Fly   613 PPPTPRSSGGGRRGRHSHHQPGTAAHIAS--LMSVRTVRYNRRNNPE-LEKRRIHHCDFVGCSKV 674

  Fly   751 YGKTSHLRAHLRWHTGERPFVCSWAFCGKRFTRSDELQRHRRTHTGEKRFQCQECNKKFMRSDHL 815
            |.|:|||:||.|.||||:|:.|.|..|..||.|||||.||.|.|||.|.|:|..|.:.|.|||||
  Fly   675 YTKSSHLKAHQRIHTGEKPYTCQWPECEWRFARSDELTRHYRKHTGAKPFKCIVCERSFARSDHL 739

  Fly   816 SKHIKTH 822
            :.|:|.|
  Fly   740 ALHMKRH 746

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SppsNP_001262902.1 COG5048 <725..827 CDD:227381 51/98 (52%)
C2H2 Zn finger 742..764 CDD:275368 13/21 (62%)
zf-H2C2_2 756..783 CDD:290200 15/26 (58%)
C2H2 Zn finger 772..794 CDD:275368 13/21 (62%)
zf-H2C2_2 786..809 CDD:290200 12/22 (55%)
zf-C2H2 800..822 CDD:278523 11/21 (52%)
C2H2 Zn finger 802..822 CDD:275368 10/19 (53%)
dar1NP_001097493.1 COG5048 641..>724 CDD:227381 41/85 (48%)
C2H2 Zn finger 671..688 CDD:275368 11/16 (69%)
zf-H2C2_2 680..707 CDD:290200 15/26 (58%)
C2H2 Zn finger 696..718 CDD:275368 13/21 (62%)
zf-H2C2_2 710..735 CDD:290200 13/24 (54%)
C2H2 Zn finger 726..746 CDD:275368 10/19 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23235
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6780
SonicParanoid 00.000 Not matched by this tool.
33.040

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