DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spps and Sp9

DIOPT Version :10

Sequence 1:NP_001262902.1 Gene:Spps / 42882 FlyBaseID:FBgn0039169 Length:985 Species:Drosophila melanogaster
Sequence 2:NP_001178831.1 Gene:Sp9 / 366078 RGDID:1559457 Length:485 Species:Rattus norvegicus


Alignment Length:332 Identity:124/332 - (37%)
Similarity:158/332 - (47%) Gaps:68/332 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   594 NSLSSLSIPASIQITALPQQATNTPNTPATTQPIPVSLPARSKVNAVT--TSSTQITIAPTGGQV 656
            :||.|.:..||:.    .|..|..|:..:.|.....|....|...|.:  .|::|..:|..|.:.
  Rat   202 SSLHSGAPQASLH----SQLGTYNPDFSSLTHSAFSSTGLGSSAAAASHLLSTSQHLLAQDGFKP 262

  Fly   657 VSVTTQARGATASIRSTNTSTTTITTPSQSHLNMNISVASVGGAATGGGGGTATGEPKPRLKRVA 721
            |            :.|.:.|:..:...:.|        |.:.|||....||::....:....|..
  Rat   263 V------------LPSYSDSSAAVAAAAAS--------AMISGAAAAAAGGSSARSARRYSGRAT 307

  Fly   722 CTCPNCTDGEKHSD------KKRQHICHITGCHKVYGKTSHLRAHLRWHTGERPFVCSWAFCGKR 780
            |.||||.:.|:...      :|..|.|||.||.|||||||||:||||||||||||||:|.|||||
  Rat   308 CDCPNCQEAERLGPAGASLRRKGLHSCHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKR 372

  Fly   781 FTRSDELQRHRRTHTGEKRFQCQECNKKFMRSDHLSKHIKTHFKSRSGVELIELSIKQETKGGNA 845
            ||||||||||.|||||||||.|..|||:||||||||||||||                 ..||..
  Rat   373 FTRSDELQRHLRTHTGEKRFACPVCNKRFMRSDHLSKHIKTH-----------------NGGGGG 420

  Fly   846 PKSISTVNGIVTIEIP------------GGGSAAAGSGASSVAATVAGSTVTPGGATIVQLPTVE 898
            .|...:......:|.|            |..:|.|.:.|::.||..|.:..:.||..       .
  Rat   421 KKGSDSDTDASNLETPRSESPDLILHDSGVSAARAAAAAAAAAAAAAAAAASAGGKE-------A 478

  Fly   899 ASGGGDS 905
            |:|..||
  Rat   479 ATGPNDS 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SppsNP_001262902.1 SP1-4_N <281..>371 CDD:425404
Atrophin-1 284..>630 CDD:460830 9/35 (26%)
SP1-4_N <713..741 CDD:425404 8/33 (24%)
C2H2 Zn finger 742..764 CDD:275368 18/21 (86%)
zf-H2C2_2 756..783 CDD:463886 23/26 (88%)
C2H2 Zn finger 772..794 CDD:275368 18/21 (86%)
zf-H2C2_2 786..809 CDD:463886 18/22 (82%)
zf-C2H2 800..822 CDD:395048 17/21 (81%)
C2H2 Zn finger 802..822 CDD:275368 16/19 (84%)
Sp9NP_001178831.1 SP9_N 19..333 CDD:411695 34/154 (22%)
C2H2 Zn finger 337..356 CDD:275368 15/18 (83%)
zf-H2C2_2 348..375 CDD:463886 23/26 (88%)
C2H2 Zn finger 364..386 CDD:275368 18/21 (86%)
zf-H2C2_2 378..401 CDD:463886 18/22 (82%)
zf-C2H2 392..414 CDD:395048 17/21 (81%)
C2H2 Zn finger 394..414 CDD:275368 16/19 (84%)
Blue background indicates that the domain is not in the aligned region.

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