DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spps and cbt

DIOPT Version :9

Sequence 1:NP_001262902.1 Gene:Spps / 42882 FlyBaseID:FBgn0039169 Length:985 Species:Drosophila melanogaster
Sequence 2:NP_722636.1 Gene:cbt / 33224 FlyBaseID:FBgn0043364 Length:428 Species:Drosophila melanogaster


Alignment Length:546 Identity:128/546 - (23%)
Similarity:207/546 - (37%) Gaps:141/546 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   364 MPYPQLPPNANIIHIQNPHQQQQQQVQQQQQQQQAQQQQQAQQQQAQQQQQQQVQAQHQQLLQAI 428
            :|.|...|         |.::.:.::..:.:||..:...:|:.:...|:.|:.            
  Fly     7 LPSPPATP---------PLRENKLEIVAKDEQQVNENLLKAKLKLVAQKSQKN------------ 50

  Fly   429 SDASAGGQLPPNQPITITNAQGQQLTVIPAQLRPNAPTAPTPAPAGVPTPMQMPNLQALPIQNIP 493
                 ||.:.||                |:.....||.        :..|.:.|.|:...:...|
  Fly    51 -----GGIITPN----------------PSDTEDEAPE--------IAVPNKKPRLEQPAMSMTP 86

  Fly   494 GLGQVQIIHANQLPPNLPANFQQVLTQLPMSHPQVQTQGQVQVMPKQEPQSPTQMITSIKQEPPD 558
                         ||:...:..|...::.:. .:|.:.|.|....:.|..|.:....|       
  Fly    87 -------------PPDQKLDDDQKAERVSVI-MRVNSSGAVSSSSQDENSSSSTSCCS------- 130

  Fly   559 TFGPISATGNPPAPASTPNTASPQQQQIKFLHTESNSLSSLSI----PASIQITALPQQATNTPN 619
                 |::....:.:|.|.|....       :.|:|...:|..    ..:.::...|.|...||.
  Fly   131 -----SSSNTNTSTSSVPPTVEDD-------YPEANVWRNLKFKMNRKRAAEVALPPVQTPETPV 183

  Fly   620 TPATTQPIPVSLPARSKVNAVTTSSTQITIAPTGGQVVSVTTQARGATASIRSTNTSTTTITTPS 684
            ....|.|.|.......::..:.|......:|.:..|::.::|        :.:..:.|....||:
  Fly   184 AKLVTPPAPAECIKEEEIKPILTPIYVSPVASSASQLILLST--------VAAQQSPTPVPKTPT 240

  Fly   685 QSHLNMNISVASVGGAATGGGGGTATGEPKPRLKRVACTCPNCTDGEKHSDKKRQHICHITGCHK 749
            .|...:...:.:...|||                                 :.|.:.|....|.|
  Fly   241 MSEEKLTTRITAAQAAAT---------------------------------RSRIYECSFPDCGK 272

  Fly   750 VYGKTSHLRAHLRWHTGERPFVCSWAFCGKRFTRSDELQRHRRTHTGEKRFQCQECNKKFMRSDH 814
            .|.|:|||:||.|.|||||||:|.|..|.|||:|||||.||:|||||||:|||..|.||||||||
  Fly   273 NYFKSSHLKAHQRVHTGERPFICKWENCDKRFSRSDELSRHKRTHTGEKKFQCSVCQKKFMRSDH 337

  Fly   815 LSKHIKTHFKSRSGVELIELSIKQETKGGNAPKSISTVNGIVTIEIPGGGSAAAGSGASSVAATV 879
            ||||:|.|.|.::......:|:.......:...|:...: :....|...||:|:.|..||.:..|
  Fly   338 LSKHVKRHNKDKANGVNRHVSLANNNTSASVAASLCDAS-LHLRAIAPAGSSASSSPISSASLQV 401

  Fly   880 -----------AGSTVTPGGATIVQL 894
                       ..|:.|.|| |::|:
  Fly   402 YSAQDLLRLQQQASSFTFGG-TLLQV 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SppsNP_001262902.1 COG5048 <725..827 CDD:227381 58/101 (57%)
C2H2 Zn finger 742..764 CDD:275368 11/21 (52%)
zf-H2C2_2 756..783 CDD:290200 18/26 (69%)
C2H2 Zn finger 772..794 CDD:275368 14/21 (67%)
zf-H2C2_2 786..809 CDD:290200 16/22 (73%)
zf-C2H2 800..822 CDD:278523 17/21 (81%)
C2H2 Zn finger 802..822 CDD:275368 15/19 (79%)
cbtNP_722636.1 zf-C2H2 263..287 CDD:278523 11/23 (48%)
C2H2 Zn finger 265..287 CDD:275368 11/21 (52%)
COG5048 <270..362 CDD:227381 57/91 (63%)
zf-H2C2_2 279..306 CDD:290200 18/26 (69%)
C2H2 Zn finger 295..317 CDD:275368 14/21 (67%)
zf-H2C2_2 309..332 CDD:290200 16/22 (73%)
zf-C2H2 323..345 CDD:278523 17/21 (81%)
C2H2 Zn finger 325..345 CDD:275368 15/19 (79%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23235
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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