DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spps and sp8b

DIOPT Version :10

Sequence 1:NP_001262902.1 Gene:Spps / 42882 FlyBaseID:FBgn0039169 Length:985 Species:Drosophila melanogaster
Sequence 2:XP_005158015.1 Gene:sp8b / 324931 ZFINID:ZDB-GENE-030131-3654 Length:455 Species:Danio rerio


Alignment Length:387 Identity:130/387 - (33%)
Similarity:171/387 - (44%) Gaps:124/387 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   558 DTFGPISATGNPPAPASTPNTAS---------------------PQQQQ--IKFLHTESNSLSSL 599
            |:||..::||: .|.:.|..|:|                     |..|.  |..:||..:||.|:
Zfish    77 DSFGTNTSTGS-SAFSLTSGTSSNSHFGNDYSVFQTSVSNNSQEPSHQPMFISKVHTSVDSLQSI 140

  Fly   600 SIPASIQITALPQQATNTPNTPATTQPIPVSLPARSKVNAVTTSSTQ--------ITIAPTGGQV 656
            ....|:   |.|.::....:.|.    ||..       :..||.::.        |.:....|..
Zfish   141 YPRMSV---AHPYESWFKSSHPG----IPTG-------DVGTTGASAWWDVGAGWIDVQNPNGAA 191

  Fly   657 VSVTTQARGATASIRS---------TNTSTTTITTPSQSHL-----------------NMNISVA 695
            :..:..:.|...|:.|         ::.|.:..:|.:..||                 ..:.|.:
Zfish   192 LQTSLHSGGLQTSLHSPLGGYNSDYSSLSHSAFSTSASPHLLTTGQHLMDGFKPVLSSYPDSSPS 256

  Fly   696 SVGGAA----TGGGGGTATGEPKPRLK----RVACTCPNCTDGEKHSD------KKRQHICHITG 746
            .:|||.    |||...:..|.|:...:    |..|.||||.:.|:...      :|..|.|||.|
Zfish   257 PLGGAGGSMLTGGPTASLAGSPRSSARRYSGRATCDCPNCQEAERLGPAGASLRRKGLHSCHIPG 321

  Fly   747 CHKVYGKTSHLRAHLRWHTGERPFVCSWAFCGKRFTRSDELQRHRRTHTGEKRFQCQECNKKFMR 811
            |.|||||||||:||||||||||||||:|.|||||||||||||||.|||||||||.|..|||:|||
Zfish   322 CGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPVCNKRFMR 386

  Fly   812 SDHLSKHIKTHFKSRSGVELIELSIKQETKGGNAPKSISTVNGIVTIEIPGGGSAAAGSGAS 873
            |||||||:|||                                      ..|||:.:|||||
Zfish   387 SDHLSKHVKTH--------------------------------------SAGGSSGSGSGAS 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SppsNP_001262902.1 SP1-4_N <281..>371 CDD:425404
Atrophin-1 284..>630 CDD:460830 23/94 (24%)
SP1-4_N <713..741 CDD:425404 9/37 (24%)
C2H2 Zn finger 742..764 CDD:275368 18/21 (86%)
zf-H2C2_2 756..783 CDD:463886 23/26 (88%)
C2H2 Zn finger 772..794 CDD:275368 18/21 (86%)
zf-H2C2_2 786..809 CDD:463886 18/22 (82%)
zf-C2H2 800..822 CDD:395048 16/21 (76%)
C2H2 Zn finger 802..822 CDD:275368 15/19 (79%)
sp8bXP_005158015.1 SP8_N 19..316 CDD:411690 51/253 (20%)
C2H2 Zn finger 320..339 CDD:275368 15/18 (83%)
zf-H2C2_2 331..358 CDD:463886 23/26 (88%)
C2H2 Zn finger 347..369 CDD:275368 18/21 (86%)
zf-H2C2_2 361..384 CDD:463886 18/22 (82%)
zf-C2H2 375..397 CDD:395048 16/21 (76%)
C2H2 Zn finger 377..397 CDD:275368 15/19 (79%)
Blue background indicates that the domain is not in the aligned region.

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