DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spps and sp8b

DIOPT Version :9

Sequence 1:NP_001262902.1 Gene:Spps / 42882 FlyBaseID:FBgn0039169 Length:985 Species:Drosophila melanogaster
Sequence 2:XP_005158015.1 Gene:sp8b / 324931 ZFINID:ZDB-GENE-030131-3654 Length:455 Species:Danio rerio


Alignment Length:387 Identity:130/387 - (33%)
Similarity:171/387 - (44%) Gaps:124/387 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   558 DTFGPISATGNPPAPASTPNTAS---------------------PQQQQ--IKFLHTESNSLSSL 599
            |:||..::||: .|.:.|..|:|                     |..|.  |..:||..:||.|:
Zfish    77 DSFGTNTSTGS-SAFSLTSGTSSNSHFGNDYSVFQTSVSNNSQEPSHQPMFISKVHTSVDSLQSI 140

  Fly   600 SIPASIQITALPQQATNTPNTPATTQPIPVSLPARSKVNAVTTSSTQ--------ITIAPTGGQV 656
            ....|:   |.|.::....:.|.    ||..       :..||.::.        |.:....|..
Zfish   141 YPRMSV---AHPYESWFKSSHPG----IPTG-------DVGTTGASAWWDVGAGWIDVQNPNGAA 191

  Fly   657 VSVTTQARGATASIRS---------TNTSTTTITTPSQSHL-----------------NMNISVA 695
            :..:..:.|...|:.|         ::.|.:..:|.:..||                 ..:.|.:
Zfish   192 LQTSLHSGGLQTSLHSPLGGYNSDYSSLSHSAFSTSASPHLLTTGQHLMDGFKPVLSSYPDSSPS 256

  Fly   696 SVGGAA----TGGGGGTATGEPKPRLK----RVACTCPNCTDGEKHSD------KKRQHICHITG 746
            .:|||.    |||...:..|.|:...:    |..|.||||.:.|:...      :|..|.|||.|
Zfish   257 PLGGAGGSMLTGGPTASLAGSPRSSARRYSGRATCDCPNCQEAERLGPAGASLRRKGLHSCHIPG 321

  Fly   747 CHKVYGKTSHLRAHLRWHTGERPFVCSWAFCGKRFTRSDELQRHRRTHTGEKRFQCQECNKKFMR 811
            |.|||||||||:||||||||||||||:|.|||||||||||||||.|||||||||.|..|||:|||
Zfish   322 CGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPVCNKRFMR 386

  Fly   812 SDHLSKHIKTHFKSRSGVELIELSIKQETKGGNAPKSISTVNGIVTIEIPGGGSAAAGSGAS 873
            |||||||:|||                                      ..|||:.:|||||
Zfish   387 SDHLSKHVKTH--------------------------------------SAGGSSGSGSGAS 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SppsNP_001262902.1 COG5048 <725..827 CDD:227381 76/107 (71%)
C2H2 Zn finger 742..764 CDD:275368 18/21 (86%)
zf-H2C2_2 756..783 CDD:290200 23/26 (88%)
C2H2 Zn finger 772..794 CDD:275368 18/21 (86%)
zf-H2C2_2 786..809 CDD:290200 18/22 (82%)
zf-C2H2 800..822 CDD:278523 16/21 (76%)
C2H2 Zn finger 802..822 CDD:275368 15/19 (79%)
sp8bXP_005158015.1 C2H2 Zn finger 320..339 CDD:275368 15/18 (83%)
zf-H2C2_2 331..358 CDD:290200 23/26 (88%)
C2H2 Zn finger 347..369 CDD:275368 18/21 (86%)
zf-H2C2_2 361..384 CDD:290200 18/22 (82%)
zf-C2H2 375..397 CDD:278523 16/21 (76%)
C2H2 Zn finger 377..397 CDD:275368 15/19 (79%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23235
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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