DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spps and sp3b

DIOPT Version :10

Sequence 1:NP_001262902.1 Gene:Spps / 42882 FlyBaseID:FBgn0039169 Length:985 Species:Drosophila melanogaster
Sequence 2:XP_005165855.1 Gene:sp3b / 322961 ZFINID:ZDB-GENE-110815-3 Length:783 Species:Danio rerio


Alignment Length:956 Identity:237/956 - (24%)
Similarity:326/956 - (34%) Gaps:416/956 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 AAGGSSKATIPPNGASAAASQ------TQVHGAPGTPTMQQIINIHQMPPQFAGGAVAGNGQNAG 79
            |:|...:.|..........|.      |.|....|.|.:     :| :|   :||.:..|||...
Zfish   163 ASGAQDQQTTDLTAIQMTGSSDRWEVLTPVSSVKGEPAV-----VH-VP---SGGLLGSNGQYVV 218

  Fly    80 MPQNMFQIVQPMPMQTVNIDGQEA-----IFIPNL----------------NAQLAT-------- 115
            ..|.|....||: ..|..:||..|     ..||.|                .:.|.|        
Zfish   219 PLQTMAGQTQPV-FVTAGVDGTGANGVQYQVIPQLQGADGASLSYTASAADGSTLGTDIAILPDG 282

  Fly   116 ----AQAVNFNGQQAFITPNGQILRAP-------------QMAANPAASNCIQLQQLNGLGQEQT 163
                |.|.|.|..|..::.:|.:.:.|             |:.||......|.|..:|.|.....
Zfish   283 TQGIATATNANDLQGLLSQSGHVQQIPTVSLAGSGFGTQGQVVANMGLPGNITLVPINSLSNVDL 347

  Fly   164 QLITIPGTNIQIPVTNLIQQQQ-------QAQQVHQGTVQQQAQGTNASGANGSG---VTNSGTA 218
            :.:.:.|.  |...|::....|       .....:||...:..:..||:.||.:.   .|.|.|:
Zfish   348 ESLGLAGA--QTIATSVTADGQLIMTGPTTTTSDNQGESGKCTESLNANDANANAFVPTTTSSTS 410

  Fly   219 GQLPGSITIPGTN-LQIPTSVAAANGLLGNISNISNLLGGGQSIKLENGQLQMRPQLVQFPAPAM 282
            ..||.  ||.||. |...|:|:|.:..|..|.. ::..||.|.::|                   
Zfish   411 TSLPE--TIDGTGVLTQATAVSAGHQDLSYIQQ-NHTTGGEQVVQL------------------- 453

  Fly   283 PQQQQTVAVQIPVQTANGQTIYQTVHVPVQAAATSSGGLQNLMQAQSLQMPSASQMQIIPQFSQI 347
                      :|.|||:|            ||.|          .||:|:.:|....|      .
Zfish   454 ----------LPAQTADG------------AAQT----------LQSVQLLNAGTFLI------Q 480

  Fly   348 AQIVTPNGQIQQVQLAMPYPQLPPNANIIHIQNPHQQQQQQVQQQQQQQQAQQQQQAQQQQAQQQ 412
            ||.|:|.|||                                                       
Zfish   481 AQTVSPTGQI------------------------------------------------------- 490

  Fly   413 QQQQVQAQHQQLLQAISDASAGGQLPPNQPITITNAQGQQLTVIPAQLRPNAPTAPTPAPAGVPT 477
            |.|..|.|..|.||.:...:|||...|            |:|:.|.|......:..|.|..    
Zfish   491 QWQTFQVQGVQNLQNLQLPAAGGVSSP------------QITLAPVQTLSLGQSGTTGALG---- 539

  Fly   478 PMQMPNLQALPIQNIPGLGQVQIIHANQLPPNLPANFQQVLTQLPMSHPQVQTQGQVQVMPKQEP 542
              |:||||.:.:.::   ||.|               |...|:   ||..:|             
Zfish   540 --QIPNLQTVTVNSV---GQYQ---------------QDENTE---SHTDIQ------------- 568

  Fly   543 QSPTQMITSIKQEPPDTFGPISATGNPPAPASTPNTASPQQQQIKFLHTESNSLSSLSIPASIQI 607
                     ||:||                                                   
Zfish   569 ---------IKEEP--------------------------------------------------- 573

  Fly   608 TALPQQATNTPNTPATTQPIPVSLPARSKVNAVTTSSTQITIAPTGGQVVSVTTQARGATASIRS 672
                 ::.:.||                                                     
Zfish   574 -----ESDDWPN----------------------------------------------------- 580

  Fly   673 TNTSTTTITTPSQSHLNMNISVASVGGAATGGGGGTATGEPKPRLKRVACTCPNCTD-GEKHSD- 735
                 :|::|...:||.:.:....:.|          ||:...||:|||||||||.: |.:.|. 
Zfish   581 -----STLSTSDLAHLRVRLVEEDMEG----------TGQEGKRLRRVACTCPNCKEAGGRGSSM 630

  Fly   736 -KKRQHICHITGCHKVYGKTSHLRAHLRWHTGERPFVCSWAFCGKRFTRSDELQRHRRTHTGEKR 799
             ||:||||||.||.||||||||||||||||:|||||:|||::||||||||||||||||||||||:
Zfish   631 GKKKQHICHIPGCGKVYGKTSHLRAHLRWHSGERPFICSWSYCGKRFTRSDELQRHRRTHTGEKK 695

  Fly   800 FQCQECNKKFMRSDHLSKHIKTHFKSRSGVELIELSIKQETKGGNAPKSISTVNGIVTIEIPGGG 864
            |.|.||:|:|||||||:||||||               |..||.|                    
Zfish   696 FVCPECSKRFMRSDHLAKHIKTH---------------QNKKGLN-------------------- 725

  Fly   865 SAAAGSGASSVAATVAGSTVTPGGATIVQLPTVEASGGGDSFGDDE 910
             :..|.|.:..||. :.:.:|.||||:: |..::.:|..|...:.:
Zfish   726 -SNTGVGQTEAAAP-SDTIITGGGATVI-LANLQQAGTQDLLSNSD 768

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SppsNP_001262902.1 SP1-4_N <281..>371 CDD:425404 20/89 (22%)
Atrophin-1 284..>630 CDD:460830 56/345 (16%)
SP1-4_N <713..741 CDD:425404 16/30 (53%)
C2H2 Zn finger 742..764 CDD:275368 19/21 (90%)
zf-H2C2_2 756..783 CDD:463886 22/26 (85%)
C2H2 Zn finger 772..794 CDD:275368 19/21 (90%)
zf-H2C2_2 786..809 CDD:463886 18/22 (82%)
zf-C2H2 800..822 CDD:395048 16/21 (76%)
C2H2 Zn finger 802..822 CDD:275368 15/19 (79%)
sp3bXP_005165855.1 THAP 9..85 CDD:461662
SP1-4_N 136..637 CDD:425404 150/785 (19%)
zf-C2H2 636..660 CDD:395048 21/23 (91%)
C2H2 Zn finger 638..660 CDD:275368 19/21 (90%)
COG5048 <651..728 CDD:227381 62/112 (55%)
C2H2 Zn finger 668..690 CDD:275368 19/21 (90%)
zf-H2C2_2 682..705 CDD:463886 18/22 (82%)
C2H2 Zn finger 698..718 CDD:275368 15/19 (79%)
Blue background indicates that the domain is not in the aligned region.

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