DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spps and sp8a

DIOPT Version :10

Sequence 1:NP_001262902.1 Gene:Spps / 42882 FlyBaseID:FBgn0039169 Length:985 Species:Drosophila melanogaster
Sequence 2:NP_998406.2 Gene:sp8a / 321264 ZFINID:ZDB-GENE-030131-9849 Length:406 Species:Danio rerio


Alignment Length:399 Identity:131/399 - (32%)
Similarity:177/399 - (44%) Gaps:82/399 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   540 QEPQ---SPTQMITSI-----KQEPPDTFGPISATGNPP----APASTPNTASPQQQQIKFLHTE 592
            :||:   :|..|:.:.     ...||...|.....|..|    ||:|...:....|:...|....
Zfish     8 EEPRVGSTPLAMLAATCNKIGSSSPPSDSGSFGKGGFHPWKRAAPSSCSLSPFGAQRNDSFSANS 72

  Fly   593 SNSLSSLSIPASIQITALPQQATNTPNTPATTQPIPVSLPARSKVNAVTTSSTQITIA------- 650
            |.||:..:...|......|...|:..|:........|.:   |||:::.....::::|       
Zfish    73 SFSLTGTTTSTSPFGNDYPVFQTSVANSSQDPSAQSVFI---SKVDSLQGIYPRMSVAHPYETWF 134

  Fly   651 -----------PTGGQVVSVTT------QARGAT--ASIRST----NTSTTTIT------TPSQS 686
                       .:|.....|.|      .|.||.  .|:.|.    |:...::|      :||..
Zfish   135 KSAHAGISSGDGSGSSWWDVGTGWIDVQSANGAALQTSLHSPLSGYNSDYPSLTHSAFSASPSPH 199

  Fly   687 HLNMN---------ISVASVGGAATGGGGGTATGEP------KPRLK------RVACTCPNCTDG 730
            .|:..         :..|:...::||.......|.|      .||..      |..|.||||.:.
Zfish   200 LLSSGQHLMDGFKPVLSATYTDSSTGANSAVLGGSPVVPLAGSPRSSTRRYSGRATCDCPNCQEA 264

  Fly   731 EKHSD------KKRQHICHITGCHKVYGKTSHLRAHLRWHTGERPFVCSWAFCGKRFTRSDELQR 789
            |:...      :|..|.|||.||.|||||||||:||||||||||||||:|.||||||||||||||
Zfish   265 ERLGPAGASLRRKGLHSCHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQR 329

  Fly   790 HRRTHTGEKRFQCQECNKKFMRSDHLSKHIKTHFKSRSGVELIELS----IKQETKGGNAPKSIS 850
            |.|||||||||.|..|||:||||||||||:|||.....|...::.|    .:|...|..|.:|..
Zfish   330 HLRTHTGEKRFSCPVCNKRFMRSDHLSKHVKTHSAGEPGSNGLKKSSDTDSEQSVPGSPACQSPE 394

  Fly   851 TVNGIVTIE 859
            .::....::
Zfish   395 MIHNTEPVQ 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SppsNP_001262902.1 SP1-4_N <281..>371 CDD:425404
Atrophin-1 284..>630 CDD:460830 21/101 (21%)
SP1-4_N <713..741 CDD:425404 11/45 (24%)
C2H2 Zn finger 742..764 CDD:275368 18/21 (86%)
zf-H2C2_2 756..783 CDD:463886 23/26 (88%)
C2H2 Zn finger 772..794 CDD:275368 18/21 (86%)
zf-H2C2_2 786..809 CDD:463886 18/22 (82%)
zf-C2H2 800..822 CDD:395048 16/21 (76%)
C2H2 Zn finger 802..822 CDD:275368 15/19 (79%)
sp8aNP_998406.2 SP6-9_N 19..281 CDD:425402 51/264 (19%)
C2H2 Zn finger 285..304 CDD:275368 15/18 (83%)
zf-H2C2_2 296..323 CDD:463886 23/26 (88%)
C2H2 Zn finger 312..334 CDD:275368 18/21 (86%)
zf-H2C2_2 326..349 CDD:463886 18/22 (82%)
zf-C2H2 340..362 CDD:395048 16/21 (76%)
C2H2 Zn finger 342..362 CDD:275368 15/19 (79%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.