DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spps and Sp8

DIOPT Version :9

Sequence 1:NP_001262902.1 Gene:Spps / 42882 FlyBaseID:FBgn0039169 Length:985 Species:Drosophila melanogaster
Sequence 2:NP_001366308.1 Gene:Sp8 / 320145 MGIID:2443471 Length:504 Species:Mus musculus


Alignment Length:286 Identity:115/286 - (40%)
Similarity:135/286 - (47%) Gaps:90/286 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   618 PNTPATTQPIPVSL-PARSKVNAVTTSSTQITIAPTGGQVVSVTTQARGATASIRSTNTSTTTIT 681
            ||..|.   :|.|| ||...:.....|       |.||    ..:...|.:.|..|:..| :.:.
Mouse   241 PNGAAA---LPGSLHPAAGGLQTSLHS-------PLGG----YNSDYSGLSHSAFSSGAS-SHLL 290

  Fly   682 TPSQSHL---------------------NMNISVASVGGAATGGGGGTATGEPKPRLK----RVA 721
            :|:..||                     ....|:.|.|.||..|      |.|:...:    |..
Mouse   291 SPAGQHLMDGFKPVLPGSYPDSAPSPLAGAGSSMLSAGPAAQLG------GSPRSSARRYSGRAT 349

  Fly   722 CTCPNCTDGEKHSD------KKRQHICHITGCHKVYGKTSHLRAHLRWHTGERPFVCSWAFCGKR 780
            |.||||.:.|:...      :|..|.|||.||.|||||||||:||||||||||||||:|.|||||
Mouse   350 CDCPNCQEAERLGPAGASLRRKGLHSCHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKR 414

  Fly   781 FTRSDELQRHRRTHTGEKRFQCQECNKKFMRSDHLSKHIKTHFKSRSGVELIELSIKQETKGGNA 845
            ||||||||||.|||||||||.|..|||:||||||||||:|||    ||                 
Mouse   415 FTRSDELQRHLRTHTGEKRFACPVCNKRFMRSDHLSKHVKTH----SG----------------- 458

  Fly   846 PKSISTVNGIVTIEIPGGGSAAAGSG 871
                            |||||.:|.|
Mouse   459 ----------------GGGSAGSGGG 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SppsNP_001262902.1 COG5048 <725..827 CDD:227381 76/107 (71%)
C2H2 Zn finger 742..764 CDD:275368 18/21 (86%)
zf-H2C2_2 756..783 CDD:290200 23/26 (88%)
C2H2 Zn finger 772..794 CDD:275368 18/21 (86%)
zf-H2C2_2 786..809 CDD:290200 18/22 (82%)
zf-C2H2 800..822 CDD:278523 16/21 (76%)
C2H2 Zn finger 802..822 CDD:275368 15/19 (79%)
Sp8NP_001366308.1 SP6-9_N 19..375 CDD:425402 35/154 (23%)
C2H2 Zn finger 379..398 CDD:275368 15/18 (83%)
zf-H2C2_2 390..417 CDD:404364 23/26 (88%)
C2H2 Zn finger 406..428 CDD:275368 18/21 (86%)
zf-H2C2_2 420..443 CDD:404364 18/22 (82%)
zf-C2H2 434..456 CDD:395048 16/21 (76%)
C2H2 Zn finger 436..456 CDD:275368 15/19 (79%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23235
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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