DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spps and Klf1

DIOPT Version :10

Sequence 1:NP_001262902.1 Gene:Spps / 42882 FlyBaseID:FBgn0039169 Length:985 Species:Drosophila melanogaster
Sequence 2:XP_006255316.1 Gene:Klf1 / 304666 RGDID:1309398 Length:381 Species:Rattus norvegicus


Alignment Length:394 Identity:109/394 - (27%)
Similarity:148/394 - (37%) Gaps:101/394 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   508 PNLPANFQQVLTQLPMSHPQVQTQGQV-QVMPKQE-----------------PQSPTQ--MITSI 552
            |......|.|:.......|.:.|...: |.:..||                 |.:||:  ...|:
  Rat     9 PEAQGGQQPVMASAETVLPSISTLTTLGQFLDTQEDFLKWWRSEETQDLGPGPPNPTEPSFHVSL 73

  Fly   553 KQEPP---DTFGPISATGNP---------PAPASTPNTASPQQQQIKFLHTESNSLSSLSIPASI 605
            |.|.|   |....::...:|         |.|.|||.|.:        |......::..:.|.|:
  Rat    74 KSEDPPGEDDERDVTCAWDPDLFLTNFSGPEPPSTPRTCA--------LAPSGGPVAQFAPPESL 130

  Fly   606 QITA---------LPQQ-----ATNTPNTPATTQPI----------PVSLPARSKVNAVTT---- 642
            ...|         |..:     |..||. |.|.:|.          |.:.||.|:..||:.    
  Rat   131 SAYAGGPGLVTGPLGSEEHAGWAHPTPR-PPTPEPFVAPVLAPGLAPKAQPAFSESRAVSAGGFF 194

  Fly   643 --SSTQITIAP-------TGGQVVSVTTQARGATASIRSTNTSTTTITTPSQSHLNM---NISVA 695
              :...:..||       :|...:....|.:|.....|.....:...|.| .|.||.   .....
  Rat   195 PRAGLAVPAAPSAPYGLLSGYPALYPAPQYQGHFQLFRGLAAPSAGPTAP-PSFLNCLGPGAVGT 258

  Fly   696 SVGGAATGGGGGTATGEPKPRLKRVACTCPNCTDGEKHSDKKRQ--HICHITGCHKVYGKTSHLR 758
            .:|..|..|..|.:.|...|:..|            :...:|||  |.|...||.|.|.|:|||:
  Rat   259 ELGATAIAGDAGLSPGAAPPKRSR------------RTLAQKRQAAHTCGHEGCGKSYTKSSHLK 311

  Fly   759 AHLRWHT-----GERPFVCSWAFCGKRFTRSDELQRHRRTHTGEKRFQCQECNKKFMRSDHLSKH 818
            ||||.||     ||:|:.|||..|..||.|||||.||.|.|||.:.|.|..|.:.|.|||||:.|
  Rat   312 AHLRTHTAPCPSGEKPYACSWDGCNWRFARSDELTRHYRKHTGHRPFCCGLCPRAFSRSDHLALH 376

  Fly   819 IKTH 822
            :|.|
  Rat   377 MKRH 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SppsNP_001262902.1 SP1-4_N <281..>371 CDD:425404
Atrophin-1 284..>630 CDD:460830 35/177 (20%)
SP1-4_N <713..741 CDD:425404 5/29 (17%)
C2H2 Zn finger 742..764 CDD:275368 13/21 (62%)
zf-H2C2_2 756..783 CDD:463886 17/31 (55%)
C2H2 Zn finger 772..794 CDD:275368 14/21 (67%)
zf-H2C2_2 786..809 CDD:463886 11/22 (50%)
zf-C2H2 800..822 CDD:395048 11/21 (52%)
C2H2 Zn finger 802..822 CDD:275368 10/19 (53%)
Klf1XP_006255316.1 KLF1_N 28..293 CDD:409227 57/286 (20%)
COG5048 <297..>380 CDD:227381 45/82 (55%)
C2H2 Zn finger 298..317 CDD:275368 12/18 (67%)
C2H2 Zn finger 330..352 CDD:275368 14/21 (67%)
C2H2 Zn finger 360..380 CDD:275368 10/19 (53%)
Blue background indicates that the domain is not in the aligned region.

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