DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spps and Sp1

DIOPT Version :9

Sequence 1:NP_001262902.1 Gene:Spps / 42882 FlyBaseID:FBgn0039169 Length:985 Species:Drosophila melanogaster
Sequence 2:NP_038700.2 Gene:Sp1 / 20683 MGIID:98372 Length:781 Species:Mus musculus


Alignment Length:994 Identity:279/994 - (28%)
Similarity:367/994 - (36%) Gaps:352/994 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 GGSSKATIPPNGASAAASQTQVHGAPGTPTMQQIINIHQMPPQFAGGAVAGNGQNAGMPQNMFQI 87
            |||.      ||..||.|||:......:.:              :||   |.||.:         
Mouse    26 GGSG------NGGGAAFSQTRSSSTGSSSS--------------SGG---GGGQES--------- 58

  Fly    88 VQPMPMQTVNIDGQEAIFIPNLNA---------------QLATAQ-AVNFNGQQAFITPNGQILR 136
             ||.|:..:...... |..||.|:               .|..|| :...||.|...:.:|....
Mouse    59 -QPSPLALLAATCSR-IESPNENSNNSQGPSQSGGTGELDLTAAQLSQGANGWQIISSSSGATPT 121

  Fly   137 APQMAANPAASNCIQLQQLNGLGQEQTQLITIPGTNIQIPVTNLIQQQQ------------QAQQ 189
            :.:.:.|  ::|          |.|.::..|:.|....:..|..:|.||            |.|.
Mouse   122 SKEQSGN--STN----------GSESSKNRTVSGGQYVVAATPNLQNQQVLTGLPGVMPNIQYQV 174

  Fly   190 VHQ-GTVQ-QQAQGTNASGANGSGVTNSGTAGQLPGSITIPGTNLQIPTSVAAANGLLGNISNIS 252
            :.| .||. ||.|    ..|.|:.|...| :||:.   .|||.|.||                |.
Mouse   175 IPQFQTVDGQQLQ----FAATGAQVQQDG-SGQIQ---IIPGANQQI----------------IP 215

  Fly   253 NLLGGGQSIKLENGQLQMRPQLVQFPAPAMPQ-QQQTVAVQ-IPVQTANGQTIYQTVHVPV---- 311
            |...||..|                  .|||. .||.|.:| :.....:|||.|.| :|||    
Mouse   216 NRGSGGNII------------------AAMPNLLQQAVPLQGLANNVLSGQTQYVT-NVPVALNG 261

  Fly   312 -------------------QAAATSSGGLQ----------NLMQAQSLQMPSASQMQIIPQFSQI 347
                               ||...||.|.|          ..:.:.||....||........:..
Mouse   262 NITLLPVNSVSAATLTPSSQAGTISSSGSQESSSQPVTSGTAISSASLVSSQASSSSFFTNANSY 326

  Fly   348 AQIVTPNGQIQQVQLAMPYPQLPPNANIIHI------------QNPHQ----QQQQQVQQQQQQQ 396
            :...|.:                 |..|::.            |.|.:    |....:..||.|.
Mouse   327 STTTTTS-----------------NMGIMNFTSSGSSGTSSQGQTPQRVGGLQGSDSLNIQQNQT 374

  Fly   397 QA---QQQQQAQQQQAQQQQQQQVQAQHQ-----QLLQAISDASAGGQLPPNQPITITNAQGQQL 453
            ..   |..||.:.:|:||.||||:..|.|     |.|||:..|...||....|.|:....|..||
Mouse   375 SGGSLQGSQQKEGEQSQQTQQQQILIQPQLVQGGQALQALQAAPLSGQTFTTQAISQETLQNLQL 439

  Fly   454 TVI----PAQLRPNAPTAPTPAPAGVPTPMQMPNLQALPIQNIPGLGQVQIIHANQLPPNLPANF 514
            ..:    |..:|     .||..|.|      ..:.|.|.:||:    |||...|           
Mouse   440 QAVQNSGPIIIR-----TPTVGPNG------QVSWQTLQLQNL----QVQNPQA----------- 478

  Fly   515 QQVLTQLPMSHPQVQTQGQVQVMPKQEPQSPTQMITSIKQEPPDTFGPISATGNPPAPASTPNTA 579
             |.:|..||       ||   |...|...|.|            |..||::..:.||...|.|.|
Mouse   479 -QTITLAPM-------QG---VSLGQTSSSNT------------TLTPIASAASIPAGTVTVNAA 520

  Fly   580 S----PQQQQIKFLHTESNSLSSLSIPASIQITALPQQATNTPNTPATTQPIPVSLPARSKVNAV 640
            .    |..|.|        :||:|. .:.||:..||.......|||.                  
Mouse   521 QLSSMPGLQTI--------NLSALG-TSGIQVHQLPGLPLAIANTPG------------------ 558

  Fly   641 TTSSTQITIAPTGGQVVSVTTQARGATASIRSTNTSTTTITTPSQSHLNMNISVASVGGAATGGG 705
             ...||:.:..:||..:.                                         ..|.||
Mouse   559 -DHGTQLGLHGSGGDGIH-----------------------------------------DETAGG 581

  Fly   706 GGTATGEPKP----RLKRVACTCPNCTDGEKHSD----KKRQHICHITGCHKVYGKTSHLRAHLR 762
            .|..:.:.:|    |.:|.|||||.|.|.|..:.    ||:||||||.||.||||||||||||||
Mouse   582 EGENSSDLQPQAGRRTRREACTCPYCKDSEGRASGDPGKKKQHICHIQGCGKVYGKTSHLRAHLR 646

  Fly   763 WHTGERPFVCSWAFCGKRFTRSDELQRHRRTHTGEKRFQCQECNKKFMRSDHLSKHIKTHFKSRS 827
            ||||||||:|:|::||||||||||||||:|||||||:|.|.||.|:||||||||||||||...:.
Mouse   647 WHTGERPFMCNWSYCGKRFTRSDELQRHKRTHTGEKKFACPECPKRFMRSDHLSKHIKTHQNKKG 711

  Fly   828 G------VELIELSIKQETKGGNAPKSISTVNGIVTIE--IPGGGSAAAGSGASSVAATVAGSTV 884
            |      |..:.|.....::|...|.::.|.| :|.:|  .|.|.:..|.||.:.:..|      
Mouse   712 GPGVALSVGTLPLDSGAGSEGTATPSALITTN-MVAMEAICPEGIARLANSGINVMQVT------ 769

  Fly   885 TPGGATIVQLPTVEASGGG 903
                    :|.::..||.|
Mouse   770 --------ELQSINISGNG 780

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SppsNP_001262902.1 COG5048 <725..827 CDD:227381 78/105 (74%)
C2H2 Zn finger 742..764 CDD:275368 19/21 (90%)
zf-H2C2_2 756..783 CDD:290200 22/26 (85%)
C2H2 Zn finger 772..794 CDD:275368 17/21 (81%)
zf-H2C2_2 786..809 CDD:290200 17/22 (77%)
zf-C2H2 800..822 CDD:278523 17/21 (81%)
C2H2 Zn finger 802..822 CDD:275368 16/19 (84%)
Sp1NP_038700.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..95 22/102 (22%)
Repressor domain. /evidence=ECO:0000250 2..84 22/91 (24%)
Transactivation domain A (Gln-rich). /evidence=ECO:0000250 145..250 38/146 (26%)
Transactivation domain B (Gln-rich). /evidence=ECO:0000250 260..494 64/287 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 279..300 6/20 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 330..395 15/81 (19%)
9aaTAD. /evidence=ECO:0000250|UniProtKB:P08047 461..469 2/7 (29%)
Transactivation domain C (highly charged). /evidence=ECO:0000250 495..608 39/193 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 563..595 8/72 (11%)
VZV IE62-binding. /evidence=ECO:0000250 617..781 93/179 (52%)
C2H2 Zn finger 626..648 CDD:275368 19/21 (90%)
COG5048 <639..710 CDD:227381 58/70 (83%)
zf-H2C2_2 640..667 CDD:290200 22/26 (85%)
C2H2 Zn finger 656..678 CDD:275368 17/21 (81%)
zf-H2C2_2 670..693 CDD:290200 17/22 (77%)
zf-C2H2 684..706 CDD:278523 17/21 (81%)
C2H2 Zn finger 686..706 CDD:275368 16/19 (84%)
Domain D. /evidence=ECO:0000250 706..781 20/90 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167841785
Domainoid 1 1.000 49 1.000 Domainoid score I11726
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 242 1.000 Inparanoid score I3300
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1085860at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm44039
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23235
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6780
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.030

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