DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spps and Klf3

DIOPT Version :10

Sequence 1:NP_001262902.1 Gene:Spps / 42882 FlyBaseID:FBgn0039169 Length:985 Species:Drosophila melanogaster
Sequence 2:NP_001099212.1 Gene:Klf3 / 114845 RGDID:1593290 Length:344 Species:Rattus norvegicus


Alignment Length:355 Identity:94/355 - (26%)
Similarity:145/355 - (40%) Gaps:71/355 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   515 QQVLTQLPMSHP-------QVQTQGQVQVMPKQEP--QSPTQMITSIKQEPPDTFGPISATGNPP 570
            |:.:..:.:|:|       :....|.:...|..:.  |:|..:...|:.||.|.  .::..|:||
  Rat    11 QEAMDPVTVSYPSNYIESMKPNKYGVIYSTPLPDKFFQTPEGLAHGIQMEPVDL--TVNKRGSPP 73

  Fly   571 APASTPNT--------ASP------QQQQIKFLHTESNSLSSLSIPAS---IQITALPQQATNTP 618
            :.|.:|::        |||      ....||.....|..:....:|.|   :...||.:....:|
  Rat    74 SAAGSPSSLKFPSHRRASPGLSMPSSSPPIKKYSPPSPGVQPFGVPLSMPPVMAAALTRHGIRSP 138

  Fly   619 N-----TPATTQPIPVSLPARSKVNAVTTSSTQITIAPTGGQVVSVTTQAR-------GATASIR 671
            .     .|...||:|....:..:...:.:.|.::..:.:|..|..:.:..:       .....|.
  Rat   139 GILPVIQPVVVQPVPFMYTSHLQQPLMVSLSEEMDNSNSGMPVPVIESYEKPILQKKIKIEPGIE 203

  Fly   672 STNTS---------TTTITTPSQSHLNMNISVASVGGAATGGGGGTATGEPKPRLKRVACTCPNC 727
            ...|.         .....:|.|:.|..|.....|              :|..|        |..
  Rat   204 PQRTDYYPEEMSPPLMNSVSPPQALLQENHPSVIV--------------QPGKR--------PLP 246

  Fly   728 TDGEKHSDKKRQHICHITGCHKVYGKTSHLRAHLRWHTGERPFVCSWAFCGKRFTRSDELQRHRR 792
            .:......|:|.|.|...||:|||.|:|||:||.|.||||:|:.|:|..|..:|.|||||.||.|
  Rat   247 VESPDTQRKRRIHRCDYDGCNKVYTKSSHLKAHRRTHTGEKPYKCTWEGCTWKFARSDELTRHFR 311

  Fly   793 THTGEKRFQCQECNKKFMRSDHLSKHIKTH 822
            .|||.|.|||.:|::.|.|||||:.|.|.|
  Rat   312 KHTGIKPFQCPDCDRSFSRSDHLALHRKRH 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SppsNP_001262902.1 SP1-4_N <281..>371 CDD:425404
Atrophin-1 284..>630 CDD:460830 31/145 (21%)
SP1-4_N <713..741 CDD:425404 5/27 (19%)
C2H2 Zn finger 742..764 CDD:275368 13/21 (62%)
zf-H2C2_2 756..783 CDD:463886 14/26 (54%)
C2H2 Zn finger 772..794 CDD:275368 12/21 (57%)
zf-H2C2_2 786..809 CDD:463886 13/22 (59%)
zf-C2H2 800..822 CDD:395048 12/21 (57%)
C2H2 Zn finger 802..822 CDD:275368 10/19 (53%)
Klf3NP_001099212.1 KLF3_N 49..259 CDD:410554 40/233 (17%)
zf-C2H2 259..283 CDD:395048 14/23 (61%)
C2H2 Zn finger 261..283 CDD:275368 13/21 (62%)
C2H2 Zn finger 291..313 CDD:275368 12/21 (57%)
zf-H2C2_2 305..330 CDD:463886 14/24 (58%)
C2H2 Zn finger 321..341 CDD:275368 10/19 (53%)
Blue background indicates that the domain is not in the aligned region.

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