DRSC/TRiP Functional Genomics Resources

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Protein Alignment twin and NGL1

DIOPT Version :10

Sequence 1:NP_732964.1 Gene:twin / 42880 FlyBaseID:FBgn0011725 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_014600.1 Gene:NGL1 / 854115 SGDID:S000005402 Length:363 Species:Saccharomyces cerevisiae


Alignment Length:399 Identity:109/399 - (27%)
Similarity:179/399 - (44%) Gaps:76/399 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   190 RPWLPLAKPNK------TRPACIFTVMCYNVLCDKYATRQMYGYCPSWALCWEYRKKSIIDEIRH 248
            |.::|:.:..|      .|....||::.||:|...|...|:|.|.......|.||.:.:..|:.:
Yeast     4 RRFIPVVQSTKQNIGKYVRKDARFTLLTYNMLSPSYMWPQVYTYVAEPYKNWSYRHRLLEKELLN 68

  Fly   249 -YAADIISLQEI---ETEQFYHFFLPELKNDGYEGIFSPKSRAKTMSELERKYV---DGCAIFFR 306
             :.|||:.|||:   :.|.::|      .:.|.:..:..|..:||..:..:|.|   ||.:||:.
Yeast    69 TFKADIMCLQEMTARDYEDYWH------DSIGVDVNYGSKFISKTPPKYWKKPVKDMDGVSIFYN 127

  Fly   307 ASKFTLIKESLIEFNQL---------------------AMANAEGSDNMLNRVMPKDNIGLAALL 350
            .:||..|..|.|..|||                     ..:|..|.|::|:.:..|:.:.|...|
Yeast   128 LAKFDFISSSGIYLNQLLNVFNQRELKYLYNKKVTLTDGASNVIGEDSLLDVLKGKNQVCLFVSL 192

  Fly   351 KVKENAWEPMSEVTQISQPLLVCTAHIHWDPEFCDVKLIQTMMLSNELKTIIDEASHSFRPGHKN 415
            :.||.           ....:|...|::|  ::.:|||.|.|::..||..||.:    ..||...
Yeast   193 RHKET-----------GTIFVVLNTHLYW--KYDEVKLTQCMIIMRELSKIIKQ----LLPGDVK 240

  Fly   416 DSNAVQLLLCGDFNSLPDSGVVEFLGKGRVSMDHLDFKDMG-YKSCLQRLLSNDTNEFTHSFKLA 479
            ....|::|..||.||..||.||.|| :|:: :.|.|...:. .:..|.|.:.:|           
Yeast   241 GQERVKILFTGDLNSTRDSLVVNFL-QGQI-VSHGDLNLINPMRPYLDRCVYDD----------- 292

  Fly   480 SAYNEDIMPHTNYTFDFKGIIDYIFYTKTGMVPLGLL--GPVSNDWLRENKVVGCPHPHIPSDHF 542
              ..:|...||.|:...|||.||::|..:..:...:|  ..||::.|..|: :|.|:.:.||||.
Yeast   293 --IPKDYFVHTCYSGKLKGIFDYVWYHDSDFLLTKILTGNEVSDELLASNQ-LGLPNENHPSDHI 354

  Fly   543 PLLVELELM 551
            |||.|.:::
Yeast   355 PLLTEFKIL 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twinNP_732964.1 LRR <52..>155 CDD:443914
leucine-rich repeat 76..98 CDD:275378
leucine-rich repeat 99..121 CDD:275378
leucine-rich repeat 122..144 CDD:275378
leucine-rich repeat 145..156 CDD:275378
Deadenylase_CCR4 209..550 CDD:197331 103/371 (28%)
NGL1NP_014600.1 CCR4 1..363 CDD:227564 109/397 (27%)
Blue background indicates that the domain is not in the aligned region.

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