DRSC/TRiP Functional Genomics Resources

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Protein Alignment twin and AT1G31500

DIOPT Version :10

Sequence 1:NP_732964.1 Gene:twin / 42880 FlyBaseID:FBgn0011725 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_001323328.1 Gene:AT1G31500 / 840040 AraportID:AT1G31500 Length:422 Species:Arabidopsis thaliana


Alignment Length:378 Identity:103/378 - (27%)
Similarity:156/378 - (41%) Gaps:89/378 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   207 FTVMCYNVLCDKYATRQMYGYCPSWALCWEYRKKSIIDEIRHYAADIISLQEI-ETEQFYHFFLP 270
            |.::.||:|...|....:..:.|...|.|:.|..:|:..:::..||...|||: |.:.||...:.
plant    97 FRLVSYNILAQVYVKSALLPHSPPACLKWKARSHAILSVLKNLQADFFCLQEVDEYDSFYRNNMD 161

  Fly   271 ELKNDGYEGIFSPKSRAKTMSELERKYVDGCAIFFRASKFTLIKESLIEFNQLA----------- 324
            .|   ||.||:..::.       :||. ||||||::.|...|:.:..||:|.|.           
plant   162 SL---GYSGIYIQRTG-------QRKR-DGCAIFYKPSCAELVTKERIEYNDLVDSIKADSVSCS 215

  Fly   325 ----MANAEGSDNM-----LNRV---MPKDNIGLAALLKVKENAWEPMSEVTQISQPLLVCTAHI 377
                ..:.||.|:.     ||..   :.:|.:|:.|..::.    :|...:      ::|...|:
plant   216 EQKIETSNEGKDSRKDSRDLNDPLVRLKRDCVGIMAAFRIN----KPFQHI------VIVANTHL 270

  Fly   378 HWDPEFCDVKLIQTMMLSNEL---KTIIDEASHSFRPGHKNDSNAVQLLLCGDFNSLPDSGVVEF 439
            :||||..||||.|...|.:.|   ||:|.:....          ...|||.|||||:|...|..:
plant   271 YWDPELADVKLAQAKYLLSRLAQFKTLISDEFEC----------TPSLLLAGDFNSIPGDMVYSY 325

  Fly   440 LGKGRVSMDHLDFKDMGYKSCLQRLLSNDTNEFTHSFKLASAY--NEDIMPHTNYTFDFKGIIDY 502
            |..|....                  :....|......|:|.|  .......||.|..|...:||
plant   326 LVSGNAKP------------------TETIEEEEAPVPLSSVYEVTRGEPKFTNCTPGFTNTLDY 372

  Fly   503 IFYTKTGMV-PLGLL---GPVSNDWLRENKVVG-CPHPHIPSDHFPLLVELEL 550
            ||.:.:..: |:.:|   .|.|.|      ||| .|:.|.||||.|:..|.|:
plant   373 IFISPSDFIKPVSILQLPEPDSPD------VVGFLPNHHHPSDHLPIGAEFEI 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twinNP_732964.1 LRR <52..>155 CDD:443914
leucine-rich repeat 76..98 CDD:275378
leucine-rich repeat 99..121 CDD:275378
leucine-rich repeat 122..144 CDD:275378
leucine-rich repeat 145..156 CDD:275378
Deadenylase_CCR4 209..550 CDD:197331 101/374 (27%)
AT1G31500NP_001323328.1 EEP 101..419 CDD:469791 101/372 (27%)
Blue background indicates that the domain is not in the aligned region.

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