DRSC/TRiP Functional Genomics Resources

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Protein Alignment twin and Lrrc27

DIOPT Version :10

Sequence 1:NP_732964.1 Gene:twin / 42880 FlyBaseID:FBgn0011725 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_081440.1 Gene:Lrrc27 / 76612 MGIID:1923862 Length:523 Species:Mus musculus


Alignment Length:418 Identity:93/418 - (22%)
Similarity:162/418 - (38%) Gaps:78/418 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 QEDIAAGKKT---NWS-----GLEITGCVRNISPSL-------------WEFEHLTALYLNDNQL 86
            ::|.||..|:   ::|     .::..|.:.:.||.|             ::..:|..|:|..|.|
Mouse    24 KDDAAAATKSFPDHFSREGDDQMDFEGVIFSSSPVLDLSQRGLRHLGKFFKIPNLQQLHLQRNLL 88

  Fly    87 LRLPAD-VGMLTSLRTLDLSSNKLRSLPAELGELIQLRELLLNNNFLRVLPYEIGKLFHLVILGL 150
            ..:|.| ..:|.:|..|||..||::.||:.:|....|:.|||..|.:::||.|:|::..|..|.|
Mouse    89 REIPEDFFQLLPNLTWLDLRYNKIKVLPSGIGSHKHLKTLLLERNPIKMLPVELGQVTTLTALNL 153

  Fly   151 MGNPLQKEFMNIYNEPNGTQKLLTYML----------DNLSFTVNPPP------QRPWLPLAKPN 199
            ...||  ||........|...:||::.          |.|...|:.|.      |.|.|||  |.
Mouse   154 RHCPL--EFPPRLIVQKGLVAILTFLRICSVEKAFPGDELLPEVSAPKMGSNDLQYPVLPL--PR 214

  Fly   200 KTRPACIFTVMCYNVLCDKYATRQMYGYCPSWAL--CWEYRKKSIIDEIRHYAADI-----ISLQ 257
            |..|:       .|.|.|....::...:.|....  ..|.||.:...||.....:|     :..:
Mouse   215 KGSPS-------ENSLNDPDQEKEKADFFPPMERLDLSELRKSNAASEIWPSKEEIRRFWKLRQE 272

  Fly   258 EIETEQFYHFFLPELKNDGYEGIFSPKSRAKTMSELERKYVDGCAIFFRASKFTLIKESLIEFNQ 322
            .:|.||.      |::......:..|.:....::..|:|:         ...:..:::....|..
Mouse   273 IVENEQV------EIQEKKLLAVELPPNLKAALNVKEKKH---------RKPWPAVRKRSTSFKG 322

  Fly   323 LAMANAEGSDNML--NRVMPKDNIGLAAL--LKVKENAWEPMSEVTQISQPLLVCTAHIHWDPEF 383
            :......|..|.:  ||:   ::...|||  |:.||...|......:..|.....|.|:....|.
Mouse   323 ILPNLPSGYQNTVHANRM---EDTHKAALQELQEKETVLEQRRRDKRALQEWREQTQHMRTRREL 384

  Fly   384 CDVKLIQTMMLSNELKTIIDEASHSFRP 411
            ..::...:.|:::::....|...:...|
Mouse   385 SKLQPPHSNMMASKIPFATDLTDYEKMP 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twinNP_732964.1 LRR <52..>155 CDD:443914 34/124 (27%)
leucine-rich repeat 76..98 CDD:275378 8/22 (36%)
leucine-rich repeat 99..121 CDD:275378 9/21 (43%)
leucine-rich repeat 122..144 CDD:275378 9/21 (43%)
leucine-rich repeat 145..156 CDD:275378 4/10 (40%)
Deadenylase_CCR4 209..550 CDD:197331 36/214 (17%)
Lrrc27NP_081440.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26 0/1 (0%)
LRR 1 55..76 3/20 (15%)
LRR <58..>164 CDD:443914 34/107 (32%)
leucine-rich repeat 58..77 CDD:275378 1/18 (6%)
LRR 2 77..98 7/20 (35%)
leucine-rich repeat 78..101 CDD:275378 8/22 (36%)
LRR 3 101..122 9/20 (45%)
leucine-rich repeat 102..124 CDD:275378 9/21 (43%)
LRR 4 124..145 9/20 (45%)
leucine-rich repeat 125..147 CDD:275378 9/21 (43%)
LRR 5 147..168 7/22 (32%)
leucine-rich repeat 148..159 CDD:275378 5/12 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 206..236 11/38 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 372..394 3/21 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 503..523
Blue background indicates that the domain is not in the aligned region.

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