DRSC/TRiP Functional Genomics Resources

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Protein Alignment twin and angel1

DIOPT Version :10

Sequence 1:NP_732964.1 Gene:twin / 42880 FlyBaseID:FBgn0011725 Length:567 Species:Drosophila melanogaster
Sequence 2:XP_021328890.2 Gene:angel1 / 569547 ZFINID:ZDB-GENE-111020-12 Length:667 Species:Danio rerio


Alignment Length:466 Identity:116/466 - (24%)
Similarity:191/466 - (40%) Gaps:146/466 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   190 RPWLPLAKPNKT-----RPACIFTVMCYNVLCDKY--ATRQMYGYCPSWALCWEYRKKSIIDEIR 247
            |.|..|::|..:     .|...|:||.||:|....  |...:|.:|...||.||.|.::::.|::
Zfish   238 RVWEDLSEPQSSDSADASPVFDFSVMSYNILAQDLLEANPHLYTHCAEDALRWENRLQAVLKELQ 302

  Fly   248 HYAADIISLQEIETEQFYHFFLPELKNDGYEGIFSPKSRAKTMSELERKYVDGCAIFFRASKFTL 312
            .:..||:.|||::.:.|.....|.|.|.||..|:..::.:||         ||||:.:|..:||.
Zfish   303 IWQPDIVCLQEVQEDHFQEQMHPVLINMGYTCIYKRRTGSKT---------DGCAVLYRGERFTQ 358

  Fly   313 IKESLIEFNQLAMANAEGSDNMLNRVMPKDNIGLAALLKVKENAWEPMSEVTQISQPLLVCTAHI 377
            :..||:||.:   :..|        ::.:||:|:..||:....   |..:.|    |:.|...|:
Zfish   359 LSVSLLEFRR---SECE--------LLDRDNVGIVLLLQPTAG---PHHQFT----PVCVANTHL 405

  Fly   378 HWDPEFCDVKLIQTMMLSNELKTIIDEASHSFRPGHKNDSNAVQLLLCGDFNSLPDSGVVEFLGK 442
            .::|...||||.|..::..|:.:::.:.        :::..:.:|:||||||::|.|.:...:..
Zfish   406 LFNPRRGDVKLAQLAIMFAEIHSVMQKC--------RSEGKSCELILCGDFNAVPRSPLWTLITT 462

  Fly   443 GRVSMDHLDF------KDMGYKSCLQRLLS----------------NDTN--------EFTHSF- 476
            |.:....|..      .|:.||:...||.|                .||:        :::|.| 
Zfish   463 GELYYHGLPTWMVSGQTDLSYKAHHNRLFSPLWPSSLGITDRCQYNTDTHTTASDGKQQYSHEFM 527

  Fly   477 ---------------------------------------------KLASAYNEDIMPHT----NY 492
                                                         .|.|||:. |.|.|    ..
Zfish   528 CQLRFCEAACVRPADLELIPGVTDKTPDLRDMFSLRFSPSLRHRLSLTSAYSH-IHPETLTDLVT 591

  Fly   493 TFDFKG--IIDYIFYT---KTG-------------MVPLGLLGPVSNDWLRENKVVGCPHPHIPS 539
            |.:.:|  ::|||||:   |:|             :..|.||.......||     |.|:...||
Zfish   592 TLNSEGAAMVDYIFYSQRQKSGFNGGGESAGGLKLLARLSLLSEAHLWSLR-----GLPNESFPS 651

  Fly   540 DHFPLLVELEL 550
            ||..|||:|:|
Zfish   652 DHLSLLVKLQL 662

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twinNP_732964.1 LRR <52..>155 CDD:443914
leucine-rich repeat 76..98 CDD:275378
leucine-rich repeat 99..121 CDD:275378
leucine-rich repeat 122..144 CDD:275378
leucine-rich repeat 145..156 CDD:275378
Deadenylase_CCR4 209..550 CDD:197331 109/440 (25%)
angel1XP_021328890.2 None
Blue background indicates that the domain is not in the aligned region.

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