| Sequence 1: | NP_732964.1 | Gene: | twin / 42880 | FlyBaseID: | FBgn0011725 | Length: | 567 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001380807.1 | Gene: | Cnot6 / 287249 | RGDID: | 1310783 | Length: | 557 | Species: | Rattus norvegicus |
| Alignment Length: | 539 | Identity: | 305/539 - (56%) |
|---|---|---|---|
| Similarity: | 388/539 - (71%) | Gaps: | 14/539 - (2%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 27 KDKYDSAN-RRQQIFLSQEDIAAGKKTNWSGLEITGCVRNISPSLWEFEHLTALYLNDNQLLRLP 90
Fly 91 ADVGMLTSLRTLDLSSNKLRSLPAELGELIQLRELLLNNNFLRVLPYEIGKLFHLVILGLMGNPL 155
Fly 156 QKEFMNIYNEPNGTQKLLTYMLDNLSFT-----VNPPPQRPWLPLAKPNKTRPACIFTVMCYNVL 215
Fly 216 CDKYATRQMYGYCPSWALCWEYRKKSIIDEIRHYAADIISLQEIETEQFYHFFLPELKNDGYEGI 280
Fly 281 FSPKSRAKTMSELERKYVDGCAIFFRASKFTLIKESLIEFNQLAMANAEGSDNMLNRVMPKDNIG 345
Fly 346 LAALLKVKENAWEPMSEVTQI---SQPLLVCTAHIHWDPEFCDVKLIQTMMLSNELKTIIDEASH 407
Fly 408 SFRPGHKNDSNAVQLLLCGDFNSLPDSGVVEFLGKGRVSMDHLDFKDMGYKSCLQRLLSNDTN-- 470
Fly 471 ---EFTHSFKLASAYNEDIMPHTNYTFDFKGIIDYIFYTKTGMVPLGLLGPVSNDWLRENKVVGC 532
Fly 533 PHPHIPSDHFPLLVELELM 551 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| twin | NP_732964.1 | LRR_4 | 74..114 | CDD:289563 | 20/39 (51%) |
| LRR_8 | 75..130 | CDD:290566 | 31/54 (57%) | ||
| leucine-rich repeat | 76..98 | CDD:275378 | 11/21 (52%) | ||
| LRR_4 | 97..136 | CDD:289563 | 23/38 (61%) | ||
| leucine-rich repeat | 99..121 | CDD:275378 | 13/21 (62%) | ||
| leucine-rich repeat | 122..144 | CDD:275378 | 16/21 (76%) | ||
| leucine-rich repeat | 145..156 | CDD:275378 | 6/10 (60%) | ||
| Deadenylase_CCR4 | 209..550 | CDD:197331 | 208/348 (60%) | ||
| Cnot6 | NP_001380807.1 | LRR | <52..>159 | CDD:227223 | 61/106 (58%) |
| LRR 1 | 52..73 | 11/20 (55%) | |||
| leucine-rich repeat | 53..75 | CDD:275378 | 11/21 (52%) | ||
| LRR 2 | 75..96 | 13/20 (65%) | |||
| leucine-rich repeat | 76..98 | CDD:275378 | 13/21 (62%) | ||
| LRR 3 | 98..120 | 15/21 (71%) | |||
| leucine-rich repeat | 99..121 | CDD:275378 | 16/21 (76%) | ||
| LRR 4 | 121..143 | 8/21 (38%) | |||
| leucine-rich repeat | 122..133 | CDD:275378 | 6/10 (60%) | ||
| Nuclease domain. /evidence=ECO:0000250 | 153..557 | 226/389 (58%) | |||
| Deadenylase_CCR4a | 191..540 | CDD:197340 | 208/348 (60%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C166337516 | |
| Domainoid | 1 | 1.000 | 416 | 1.000 | Domainoid score | I640 |
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 635 | 1.000 | Inparanoid score | I800 |
| OMA | 1 | 1.010 | - | - | QHG57444 | |
| OrthoDB | 1 | 1.010 | - | - | D208223at33208 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0002437 | |
| OrthoInspector | 1 | 1.000 | - | - | otm44913 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_101771 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR12121 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 1 | 1.000 | - | - | X1441 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 13 | 12.910 | |||||