DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment twin and SPOM_SPBC9B6.11C

DIOPT Version :10

Sequence 1:NP_732964.1 Gene:twin / 42880 FlyBaseID:FBgn0011725 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_595753.1 Gene:SPOM_SPBC9B6.11C / 2541286 PomBaseID:SPBC9B6.11C Length:502 Species:Schizosaccharomyces pombe


Alignment Length:472 Identity:100/472 - (21%)
Similarity:166/472 - (35%) Gaps:163/472 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 NPPPQ-------RPWL--PLAKPNKTRPACI-FTVMCYNVLCDKYATRQMYGYCPSWALCWEYRK 239
            |.||:       |..|  |...|.:|..:.: .|:|.||||......|.|:.:... ||.|:.|.
pombe    89 NAPPEFNTDFIKREMLSIPNYAPFETEKSALDITIMTYNVLAQTNIRRSMFPHSGE-ALKWKNRS 152

  Fly   240 KSIIDEIRHYAADIISLQEIETEQFYHFFLPELKNDGYEGIFSPKSRAKTMSELERKYVDGCAIF 304
            :.:.:|:.:|:..:..:||::.|...:|:...|...|||..|. |...||         .|..||
pombe   153 RMLANELTYYSPTLGCMQEVDAEFVPNFYKKLLGGLGYELHFI-KGEGKT---------HGIMIF 207

  Fly   305 FRASKFTLIKESLIEFNQLAMANAEGSDNMLNRVMPKDNIGLAALLKVKENAWEPMSEVTQISQP 369
            :::|.|..:::..|.:        :..|.:..|:..| |||....|:          .|...|:.
pombe   208 WKSSLFKKVQDLTIYY--------DDHDELPGRMNTK-NIGCCVRLE----------RVDDPSRG 253

  Fly   370 LLVCTAHIHWDPEFCDVKLIQTMMLSNELKTIIDEASHSFRPGHKNDSNAVQLLLCGDFNSLP-- 432
            |.:.|.|:.|.|.....:|.|..:|..|:..:..  ||...|          :.:.||||:.|  
pombe   254 LFLATTHLFWHPYGSYERLRQGAILVKEVNKMAQ--SHPSWP----------VFIAGDFNTEPFD 306

  Fly   433 ----------------DSGVVEFLGKGRVSMDH------LDFKDMGYKSCLQRLLSNDTNE---- 471
                            .:.::|      .||::      |:.|:...|:      .||:||    
pombe   307 TNFPALTTRPLSICQRATDIIE------RSMNYVFGESELEEKNASTKT------ENDSNEDDKE 359

  Fly   472 -----FTHSFKLASA---------YNEDIMPH--------------------------------- 489
                 .|.|...::|         ...|.:||                                 
pombe   360 ECQSSSTSSVPESTASTPKKRILHVQNDYVPHYRSFYQQHEQNPVLFSLYSVGYKLVHPENAKNT 424

  Fly   490 ------TNYTFDFKGIIDYIF--------YTKTGMVPLG------LLGPVSNDWLRENKVVGCPH 534
                  ||:...::|.:||||        .|....|..|      |..|:.::......:.|   
pombe   425 FDHPAFTNWAHAYQGHLDYIFVMNRDTSLQTPENQVVEGIKLKALLRVPLPSEMKEAEPLEG--- 486

  Fly   535 PHIPSDHFPLLVELELM 551
             ..||||..|:..::::
pombe   487 -RYPSDHVALMANVQIV 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twinNP_732964.1 LRR <52..>155 CDD:443914
leucine-rich repeat 76..98 CDD:275378
leucine-rich repeat 99..121 CDD:275378
leucine-rich repeat 122..144 CDD:275378
leucine-rich repeat 145..156 CDD:275378
Deadenylase_CCR4 209..550 CDD:197331 91/435 (21%)
SPOM_SPBC9B6.11CNP_595753.1 CCR4 86..502 CDD:227564 100/470 (21%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.