| Sequence 1: | NP_732964.1 | Gene: | twin / 42880 | FlyBaseID: | FBgn0011725 | Length: | 567 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001129877.1 | Gene: | ccr-4 / 178184 | WormBaseID: | WBGene00000376 | Length: | 677 | Species: | Caenorhabditis elegans |
| Alignment Length: | 392 | Identity: | 202/392 - (51%) |
|---|---|---|---|
| Similarity: | 266/392 - (67%) | Gaps: | 15/392 - (3%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 179 NLSFTVNPPPQRPWLPLAKPNKTRPACIFTVMCYNVLCDKYATRQMYGYCPSWALCWEYRKKSII 243
Fly 244 DEIRHYAADIISLQEIETEQFYHFFLPELKNDGYEGIFSPKSRAKTMSELERKYVDGCAIFFRAS 308
Fly 309 KFTLIKESLIEFNQLAMANAEGSDNMLNRVMPKDNIGLAALLKVKENAWE---------PMSEVT 364
Fly 365 QISQPLLVCTAHIHWDPEFCDVKLIQTMMLSNELKTIIDEASHSFRPGHKNDSNAVQLLLCGDFN 429
Fly 430 SLPDSGVVEFLGKGRVSMDHLDFKDMGYKSCLQRLL-SNDTNEFTHSFKLASAYNEDIMPHTNYT 493
Fly 494 FDFKGIIDYIFYTKTGMVPLGLLGPVSNDWLRENKVVGCPHPHIPSDHFPLLVELELMHTASQQA 558
Fly 559 PP 560 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| twin | NP_732964.1 | LRR_4 | 74..114 | CDD:289563 | |
| LRR_8 | 75..130 | CDD:290566 | |||
| leucine-rich repeat | 76..98 | CDD:275378 | |||
| LRR_4 | 97..136 | CDD:289563 | |||
| leucine-rich repeat | 99..121 | CDD:275378 | |||
| leucine-rich repeat | 122..144 | CDD:275378 | |||
| leucine-rich repeat | 145..156 | CDD:275378 | |||
| Deadenylase_CCR4 | 209..550 | CDD:197331 | 189/350 (54%) | ||
| ccr-4 | NP_001129877.1 | Deadenylase_CCR4 | 293..639 | CDD:197331 | 189/350 (54%) |
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C160159113 | |
| Domainoid | 1 | 1.000 | 378 | 1.000 | Domainoid score | I452 |
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H100830 | |
| Inparanoid | 1 | 1.050 | 418 | 1.000 | Inparanoid score | I1016 |
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D208223at33208 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0002437 | |
| OrthoInspector | 1 | 1.000 | - | - | oto17259 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_101771 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR12121 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3216 |
| SonicParanoid | 1 | 1.000 | - | - | X1441 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 13 | 12.930 | |||||