DRSC/TRiP Functional Genomics Resources

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Protein Alignment twin and LOC1280034

DIOPT Version :10

Sequence 1:NP_732964.1 Gene:twin / 42880 FlyBaseID:FBgn0011725 Length:567 Species:Drosophila melanogaster
Sequence 2:XP_061512314.1 Gene:LOC1280034 / 1280034 VectorBaseID:AGAMI1_000457 Length:626 Species:Anopheles gambiae


Alignment Length:429 Identity:104/429 - (24%)
Similarity:183/429 - (42%) Gaps:84/429 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   165 EPNGTQKLLTYMLD------NLSFTVNPPPQR----PWLPLAKPNKTRPA---C------IFT-- 208
            ||.|::  |:|::.      :|.|:..|..:.    |...:..|...:..   |      :||  
Mosquito   235 EPVGSE--LSYLVQKVDVGLHLKFSCTPTDEAGRTGPLTEIISPQPVQAGPGLCPFEVRHLFTQQ 297

  Fly   209 --------VMCYNVLCD-----KYATRQMYGYCPSWALCWEYRKKSIIDEIRHYAADIISLQEIE 260
                    |:.||:|.|     :|:...::||...:||..:|||:..:.||..|.||:|.|||::
Mosquito   298 KLRDGQFRVVSYNILADLYTDSEYSRTVLFGYTAPYALEIDYRKQLFVKEILGYRADLICLQEVD 362

  Fly   261 TEQFYHFFLPELKNDGYEGIFSPKSRAKTMSELERKYVDGCAIFFRASKFTLIK-------ESLI 318
            |:.|....:|         |||.|:.|... :.:.|..:|.|.|:..:||.|::       |.|.
Mosquito   363 TKVFSLDLVP---------IFSRKNLAGHY-QAKGKVAEGLATFYDLNKFELLEKDGVILSEILE 417

  Fly   319 EFNQLAMANAEGSDNMLNRVMPKDNIGLAALLKVKENAWEPMSEVTQISQPLLVCTAHIHWDPEF 383
            .:.|| ......:..::.|:..:.......||:.|.   :|...       |||...|:::.|:.
Mosquito   418 RYPQL-WDRIRDNQPLVERIANRSTALQLTLLRSKH---DPRKH-------LLVANTHLYFAPDA 471

  Fly   384 CDVKLIQTMMLSNELKTIIDEASHSFRPGHKNDSNAVQLLLCGDFNSLPDSGVVEFLGKGRVSMD 448
            ..|:|:|   :...::.:.::.....:....:::..:.|:.||||||.|:.|:.:.:.:..|..|
Mosquito   472 DHVRLLQ---MGYAMQYVCEQHERIRQQYELSEATDLALVFCGDFNSTPECGIYQLMTQQAVGPD 533

  Fly   449 HLDF---KDMGYKSCLQRLLSNDTNEFTHSFKLASAYNEDIMPHTNYTFDFKGIIDYIFYTKTGM 510
            ..|:   .|...|..          ..:..|::.||..  ...:||||..||..|||||:.:..:
Mosquito   534 VPDWVSNVDEAVKGV----------SLSQPFQMGSACG--CPEYTNYTVGFKACIDYIFFMRGAL 586

  Fly   511 VPLGLLGPVSNDWLRENKVVGCPHPHIPSDHFPLLVELE 549
            ....::...|.:.|...:.:  |....||||..|:...|
Mosquito   587 NVNDVIPMPSEEELSLYQAI--PSLVFPSDHIALVANFE 623

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twinNP_732964.1 LRR <52..>155 CDD:443914
leucine-rich repeat 76..98 CDD:275378
leucine-rich repeat 99..121 CDD:275378
leucine-rich repeat 122..144 CDD:275378
leucine-rich repeat 145..156 CDD:275378
Deadenylase_CCR4 209..550 CDD:197331 91/356 (26%)
LOC1280034XP_061512314.1 None
Blue background indicates that the domain is not in the aligned region.

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