DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment twin and twin

DIOPT Version :10

Sequence 1:NP_732964.1 Gene:twin / 42880 FlyBaseID:FBgn0011725 Length:567 Species:Drosophila melanogaster
Sequence 2:XP_313691.2 Gene:twin / 1274550 VectorBaseID:AGAMI1_006235 Length:548 Species:Anopheles gambiae


Alignment Length:548 Identity:450/548 - (82%)
Similarity:498/548 - (90%) Gaps:3/548 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 MSRNKDKYDSAN-RRQQIFLSQEDIAAGKKTNWSGLEITGCVRNISPSLWEFEHLTALYLNDNQL 86
            ||||||||:|.| ||||.||:.|||||||||.|.|:||||.|||:||:||:|||||||:||||.|
Mosquito     1 MSRNKDKYESNNPRRQQTFLTAEDIAAGKKTCWHGIEITGSVRNLSPTLWKFEHLTALFLNDNCL 65

  Fly    87 LRLPADVGMLTSLRTLDLSSNKLRSLPAELGELIQLRELLLNNNFLRVLPYEIGKLFHLVILGLM 151
            .|||..:|.|.:|||||||:||||||||||||||||||||||||:|||||||:||||:|.:|||.
Mosquito    66 TRLPHQIGQLANLRTLDLSANKLRSLPAELGELIQLRELLLNNNYLRVLPYELGKLFNLHVLGLH 130

  Fly   152 GNPLQKEFMNIYNEPNGTQKLLTYMLDNLSFTVNPPPQRPWLPLAKPNKTRPACIFTVMCYNVLC 216
            ||||.|:.::||||||||.|||||||||||.||.|||||||:|||:||:.|.|||||||||||||
Mosquito   131 GNPLGKDVLSIYNEPNGTSKLLTYMLDNLSVTVAPPPQRPWIPLARPNRNRGACIFTVMCYNVLC 195

  Fly   217 DKYATRQMYGYCPSWALCWEYRKKSIIDEIRHYAADIISLQEIETEQFYHFFLPELKNDGYEGIF 281
            |||||||||||||||||.||||||:|:|||||||||||||||:||:||::||.||||||||||||
Mosquito   196 DKYATRQMYGYCPSWALSWEYRKKAILDEIRHYAADIISLQEVETDQFFNFFKPELKNDGYEGIF 260

  Fly   282 SPKSRAKTMSELERKYVDGCAIFFRASKFTLIKESLIEFNQLAMANAEGSDNMLNRVMPKDNIGL 346
            |||||||||||.:||||||||||||::|||||||.|:||||||||||||||||||||||||||||
Mosquito   261 SPKSRAKTMSEADRKYVDGCAIFFRSAKFTLIKEHLVEFNQLAMANAEGSDNMLNRVMPKDNIGL 325

  Fly   347 AALLKVKENAWEPM-SEVTQISQPLLVCTAHIHWDPEFCDVKLIQTMMLSNELKTIIDEASHSFR 410
            ||||||||.|||.: ||..|||||:|||||||||||||||||||||||||||||||:|||..|||
Mosquito   326 AALLKVKEGAWESVSSEAAQISQPILVCTAHIHWDPEFCDVKLIQTMMLSNELKTILDEAGLSFR 390

  Fly   411 PGHKNDSNAVQLLLCGDFNSLPDSGVVEFLGKGRVSMDHLDFKDMGYKSCLQRLLSNDT-NEFTH 474
            ||||.|.|.|||:|||||||||||||:|||..|||||||.|||::||||||||:.:.|| |||||
Mosquito   391 PGHKFDVNNVQLVLCGDFNSLPDSGVIEFLSAGRVSMDHQDFKELGYKSCLQRISNCDTPNEFTH 455

  Fly   475 SFKLASAYNEDIMPHTNYTFDFKGIIDYIFYTKTGMVPLGLLGPVSNDWLRENKVVGCPHPHIPS 539
            ||||||||:|||||:|||||:||||||||||:|.||||||||||:|.:|||:|||||||||||||
Mosquito   456 SFKLASAYSEDIMPYTNYTFEFKGIIDYIFYSKQGMVPLGLLGPISPEWLRDNKVVGCPHPHIPS 520

  Fly   540 DHFPLLVELELMHTASQQAPPNGLINRR 567
            |||||||||||:|..:..|.|||||.||
Mosquito   521 DHFPLLVELELIHMPTAGAQPNGLIGRR 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twinNP_732964.1 LRR <52..>155 CDD:443914 79/102 (77%)
leucine-rich repeat 76..98 CDD:275378 14/21 (67%)
leucine-rich repeat 99..121 CDD:275378 20/21 (95%)
leucine-rich repeat 122..144 CDD:275378 19/21 (90%)
leucine-rich repeat 145..156 CDD:275378 7/10 (70%)
Deadenylase_CCR4 209..550 CDD:197331 294/342 (86%)
twinXP_313691.2 LRR <42..>134 CDD:443914 72/91 (79%)
leucine-rich repeat 55..77 CDD:275380 13/21 (62%)
leucine-rich repeat 78..100 CDD:275380 20/21 (95%)
leucine-rich repeat 101..123 CDD:275380 19/21 (90%)
Deadenylase_CCR4 188..531 CDD:197331 295/344 (86%)

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