DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6204 and AT5G52090

DIOPT Version :9

Sequence 1:NP_651229.2 Gene:CG6204 / 42877 FlyBaseID:FBgn0039165 Length:903 Species:Drosophila melanogaster
Sequence 2:NP_200022.1 Gene:AT5G52090 / 835285 AraportID:AT5G52090 Length:676 Species:Arabidopsis thaliana


Alignment Length:604 Identity:144/604 - (23%)
Similarity:233/604 - (38%) Gaps:179/604 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   450 LNESQKTAFKEAL----C---REFSIIQGPPGTGKTHLSVQLVNSLIQ-NAKALGTGP------- 499
            ||.||:.|....|    |   ....:|.|||.||||.....|:.:|:: ..|.:...|       
plant    58 LNSSQEDAILGCLETRNCTHKNSVKLIWGPPRTGKTKTVATLLFALLKLRCKTVVCAPTNTAIVQ 122

  Fly   500 ----IIVLTYTNNSLDKFLVKISRYTQEILRFGNQSR---------------DPQISKFNLSTTI 545
                ::.|...|::.:....::.    .|:..||:.|               |.:|.|..     
plant   123 VTSRLLSLFKENSTAENATYRLG----NIILSGNRDRMGINKNDHVLLDVFLDERIGKLG----- 178

  Fly   546 KPELVPPRLKRIWWLVNCEYKEKF-RNLQGLY--------------------------------- 576
              :|..|   ...|:...|...:| .|.:|.|                                 
plant   179 --KLFSP---FSGWMQRLESLIQFLENPEGKYERHVYELEEVERMNEEDEREEVVVNIPTFGEFV 238

  Fly   577 -ANFDG-SEE-----------------SYQDT---LAAQEKLNQV-------AERIETLRMVFQF 612
             .||:. |||                 .|:|.   :|:::.|.::       :.|::.....|:|
plant   239 QKNFNSLSEEVKTCIVDLYTHLPKVYLPYEDVKKMIASRQTLQRIRYFLRENSSRVDFEEGNFRF 303

  Fly   613 ----------------------------------FLAREKDLLAMTTTCAARHNFLFRLLQSKCV 643
                                              |..:..|::..|.:.||..| :.|....:.:
plant   304 DCFKRLSDDCLKALRLLPKRFEIPDMLENEDIRKFCLQNADIILCTASGAAEMN-VERTGNVELL 367

  Fly   644 LFEEAAEIQEAHIVACL-TPHTEHVILVGDHKQLQPFSGSRKVPQI----SLFERLIVAGLPFSR 703
            :.:|||:::|...||.| .|...|.||:||..||.....:....:.    ||||||::.|.....
plant   368 VVDEAAQLKECESVAALQLPGLRHAILIGDEFQLPAMVHNEMCEKAKFGRSLFERLVLLGHNKHL 432

  Fly   704 LNLQYRMRSCISELLVPSIY-DELLCSESVKE--YEDIRLMSKNLY----FVQHNQPEHCMSD-M 760
            |::||||...||.......| ..:..:|:|||  |:. |.:..|::    |:...:.:....| .
plant   433 LDVQYRMHPSISRFPNKEFYGGRIKDAENVKESIYQK-RFLKGNMFDSFSFINVGRGKEEFGDGH 496

  Fly   761 SIGNLYEAGVLAKLTEFLIQKAQYKHS-------DIVILSPYNGQIECIKNALPQNYRS------ 812
            |..|:.|..|::::...|     ||.|       .:.::|||.||:..|:..:...|.|      
plant   497 SPKNMVEVAVISEIISNL-----YKVSCERRMKVSVGVVSPYKGQMRAIQEKIGDKYSSLSGQQF 556

  Fly   813 TVQVASVDSFQGLEANIVLLSLVRSNISGRIGFLRQANRVCVALSRARWALYIVGNVTILKDTFP 877
            |:.|.|||.|||.|.:|:::|.||||.:|::|||....|..|||:|||..|:::||.|.|. ...
plant   557 TLNVRSVDGFQGGEEDIIIISTVRSNGNGKVGFLNNRQRANVALTRARHCLWVIGNETTLA-LSG 620

  Fly   878 KIWNPIVKRLKENNAIGEA 896
            .||..::...:......:|
plant   621 SIWATLISESRTRGCFHDA 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6204NP_651229.2 AAA_11 449..679 CDD:289831 70/360 (19%)
AAA_19 467..>513 CDD:289986 14/57 (25%)
UvrD_C_2 688..869 CDD:304668 68/205 (33%)
AT5G52090NP_200022.1 AAA_11 57..408 CDD:289831 70/364 (19%)
DEXDc 83..>165 CDD:238005 18/85 (21%)
DNA2 <324..616 CDD:224037 92/298 (31%)
AAA_12 415..612 CDD:289832 67/202 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1112
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D271662at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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