DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6204 and CG31368

DIOPT Version :9

Sequence 1:NP_651229.2 Gene:CG6204 / 42877 FlyBaseID:FBgn0039165 Length:903 Species:Drosophila melanogaster
Sequence 2:NP_996198.2 Gene:CG31368 / 41437 FlyBaseID:FBgn0051368 Length:1486 Species:Drosophila melanogaster


Alignment Length:787 Identity:173/787 - (21%)
Similarity:307/787 - (39%) Gaps:244/787 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   275 DVDELKQQGLLWSDVHLTLNPQFANAQRHSLVFLKVQFTKESKNAYKTWLNSIKSGTLL---CLT 336
            |:|:| |:|.  .||:.:.|           :.::   .|..:|.:|..|.:|:.  |:   |:.
  Fly   652 DMDDL-QEGA--DDVYESFN-----------ILMR---RKPKENNFKAVLETIRH--LMNTECVV 697

  Fly   337 TSLAFDDLILASVGYTEPEKLKEDCLSVQIVKQYNIGNAYNRPLIMFQAPVFFEPYLRVHNYLST 401
            .....|.|:    ||.:|                  |.|:...:...:..:.|......:|:|..
  Fly   698 PPWLHDILL----GYGDP------------------GAAHYSNMPNQERSLEFNDTFMDYNHLEA 740

  Fly   402 CSTEKFPMGRYIVDGQMEIP-----PPAYM------------------KPGVKLSFNM------- 436
                .||  :|.:  :.|:|     ||..:                  ||..||:.::       
  Fly   741 ----SFP--QYNL--KCEVPVENRQPPFRLIFEDVPIQKESDGEDPEEKPEEKLTKSILVQPYKY 797

  Fly   437 ---KPFTLDKLPED-LHLNESQKTAFKEALCREFSIIQGPPGTGKTHLSVQLVNSLIQNAKALGT 497
               .|:..||..:: :....:|..|.:..:....:::.||||||||.::||:::::..|.....|
  Fly   798 EARGPYPSDKPKQNSIRFTPTQVEAIRAGMQPGLTLVVGPPGTGKTDVAVQIISNIYHNHPNQRT 862

  Fly   498 GPIIVLTYTNNSLDKFLVKISRY---TQEILRFGNQSRDPQISK-------FNLSTTIKPELVPP 552
               :::|::|.:|::...||...   .:.:||.|:.....:..|       .|.....:.:|: .
  Fly   863 ---LIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEALETEKDYSRYGRVNYVLAKRMDLL-S 923

  Fly   553 RLKRI-------------------WWLVNCEYK-EKFR----------NLQGLYANFD------- 580
            :::::                   ::|.|...: |||:          :.:.|.|.|:       
  Fly   924 QVQKLQEALGVSGDNAYTCETAGYFYLYNVMARWEKFQSQISVHKGEADAEKLRAEFEKEFPFGK 988

  Fly   581 ------------GSEESYQDTLAA-----QEKLNQVAE--RIETLRMVF---QFFLAREKDLLAM 623
                        .:.:...|...:     .:..|::.|  ..|.||...   ::.|.:|..::||
  Fly   989 FFADAPQPLFKGANYDELMDIACSNFRYISDIFNELEEFRAFELLRTGLDRSKYLLVKEAKIIAM 1053

  Fly   624 TTTCAARH-----NFLFRLLQSKCVLFEEAAEIQEAHIVACL---TP-----HTEHVILVGDHKQ 675
            |.|.||..     |..||.   ..:|.||:|:|.|......|   .|     ..:..|::|||.|
  Fly  1054 TCTHAALKRKELVNLGFRY---DNILMEESAQILEIETFIPLLLQNPLDGLNRLKRWIMIGDHHQ 1115

  Fly   676 LQP------FSGSRKVPQISLFERLIVAGLPFSRLNLQYRMRSCISELLV--------------- 719
            |.|      |.....:.| |||.||:..|:|...|:.|.|.|:.|..|..               
  Fly  1116 LPPVIKNMAFQKYSNMEQ-SLFTRLVRLGVPTVDLDGQGRARASICSLYKWRYKKLEDLQHIFER 1179

  Fly   720 -------PS-IYDELLCSESVKEYEDIRLMSKNLYFVQHNQPEHCMSDMSIGNLYEAGVLAKLTE 776
                   |. ::|..|.  :|::::.:.....|.||.|              ||.||..:..:..
  Fly  1180 DEYKQANPGFVHDYQLI--NVEDFKGVGESEPNPYFYQ--------------NLAEAEYIVAVYM 1228

  Fly   777 FLIQKAQYKHSDIVILSPYNGQIECIKNALPQNYRS--------TVQVASVDSFQGLEANIVLLS 833
            :: :...|..:.|.||:.||||...|::.:  |.|.        ..::.:||.:||.:.:.:|:|
  Fly  1229 YM-RLLGYPAAKISILTTYNGQKHLIRDVI--NARCGNNPLIGWPHKITTVDKYQGQQNDYILIS 1290

  Fly   834 LVRSNISGRIGFLRQANRVCVALSRARWALYIVGNVTILKD------TFPKIWNPIVKRLKENNA 892
            |||:.   .:|.||...|:.||:||||..||:.|.|::.|:      ||..:..   :.||.:..
  Fly  1291 LVRTK---AVGHLRDVRRLVVAMSRARLGLYVFGRVSLFKNCLELQQTFKLLTQ---RPLKLSLV 1349

  Fly   893 IGEAFPT 899
            ..:.|||
  Fly  1350 PEDKFPT 1356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6204NP_651229.2 AAA_11 449..679 CDD:289831 65/317 (21%)
AAA_19 467..>513 CDD:289986 15/45 (33%)
UvrD_C_2 688..869 CDD:304668 58/211 (27%)
CG31368NP_996198.2 Aquarius_N 33..815 CDD:293008 39/211 (18%)
AAA_11 818..1123 CDD:289831 65/311 (21%)
AAA_19 821..893 CDD:289986 20/74 (27%)
DNA2 <1012..1348 CDD:224037 97/364 (27%)
UvrD_C_2 1131..1321 CDD:304668 58/212 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438972
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10887
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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