DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6204 and CG31368

DIOPT Version :10

Sequence 1:NP_651229.2 Gene:CG6204 / 42877 FlyBaseID:FBgn0039165 Length:903 Species:Drosophila melanogaster
Sequence 2:NP_996198.2 Gene:CG31368 / 41437 FlyBaseID:FBgn0051368 Length:1486 Species:Drosophila melanogaster


Alignment Length:787 Identity:173/787 - (21%)
Similarity:307/787 - (39%) Gaps:244/787 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   275 DVDELKQQGLLWSDVHLTLNPQFANAQRHSLVFLKVQFTKESKNAYKTWLNSIKSGTLL---CLT 336
            |:|:| |:|.  .||:.:.|           :.::   .|..:|.:|..|.:|:.  |:   |:.
  Fly   652 DMDDL-QEGA--DDVYESFN-----------ILMR---RKPKENNFKAVLETIRH--LMNTECVV 697

  Fly   337 TSLAFDDLILASVGYTEPEKLKEDCLSVQIVKQYNIGNAYNRPLIMFQAPVFFEPYLRVHNYLST 401
            .....|.|:    ||.:|                  |.|:...:...:..:.|......:|:|..
  Fly   698 PPWLHDILL----GYGDP------------------GAAHYSNMPNQERSLEFNDTFMDYNHLEA 740

  Fly   402 CSTEKFPMGRYIVDGQMEIP-----PPAYM------------------KPGVKLSFNM------- 436
                .||  :|.:  :.|:|     ||..:                  ||..||:.::       
  Fly   741 ----SFP--QYNL--KCEVPVENRQPPFRLIFEDVPIQKESDGEDPEEKPEEKLTKSILVQPYKY 797

  Fly   437 ---KPFTLDKLPED-LHLNESQKTAFKEALCREFSIIQGPPGTGKTHLSVQLVNSLIQNAKALGT 497
               .|:..||..:: :....:|..|.:..:....:::.||||||||.::||:::::..|.....|
  Fly   798 EARGPYPSDKPKQNSIRFTPTQVEAIRAGMQPGLTLVVGPPGTGKTDVAVQIISNIYHNHPNQRT 862

  Fly   498 GPIIVLTYTNNSLDKFLVKISRY---TQEILRFGNQSRDPQISK-------FNLSTTIKPELVPP 552
               :::|::|.:|::...||...   .:.:||.|:.....:..|       .|.....:.:|: .
  Fly   863 ---LIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEALETEKDYSRYGRVNYVLAKRMDLL-S 923

  Fly   553 RLKRI-------------------WWLVNCEYK-EKFR----------NLQGLYANFD------- 580
            :::::                   ::|.|...: |||:          :.:.|.|.|:       
  Fly   924 QVQKLQEALGVSGDNAYTCETAGYFYLYNVMARWEKFQSQISVHKGEADAEKLRAEFEKEFPFGK 988

  Fly   581 ------------GSEESYQDTLAA-----QEKLNQVAE--RIETLRMVF---QFFLAREKDLLAM 623
                        .:.:...|...:     .:..|::.|  ..|.||...   ::.|.:|..::||
  Fly   989 FFADAPQPLFKGANYDELMDIACSNFRYISDIFNELEEFRAFELLRTGLDRSKYLLVKEAKIIAM 1053

  Fly   624 TTTCAARH-----NFLFRLLQSKCVLFEEAAEIQEAHIVACL---TP-----HTEHVILVGDHKQ 675
            |.|.||..     |..||.   ..:|.||:|:|.|......|   .|     ..:..|::|||.|
  Fly  1054 TCTHAALKRKELVNLGFRY---DNILMEESAQILEIETFIPLLLQNPLDGLNRLKRWIMIGDHHQ 1115

  Fly   676 LQP------FSGSRKVPQISLFERLIVAGLPFSRLNLQYRMRSCISELLV--------------- 719
            |.|      |.....:.| |||.||:..|:|...|:.|.|.|:.|..|..               
  Fly  1116 LPPVIKNMAFQKYSNMEQ-SLFTRLVRLGVPTVDLDGQGRARASICSLYKWRYKKLEDLQHIFER 1179

  Fly   720 -------PS-IYDELLCSESVKEYEDIRLMSKNLYFVQHNQPEHCMSDMSIGNLYEAGVLAKLTE 776
                   |. ::|..|.  :|::::.:.....|.||.|              ||.||..:..:..
  Fly  1180 DEYKQANPGFVHDYQLI--NVEDFKGVGESEPNPYFYQ--------------NLAEAEYIVAVYM 1228

  Fly   777 FLIQKAQYKHSDIVILSPYNGQIECIKNALPQNYRS--------TVQVASVDSFQGLEANIVLLS 833
            :: :...|..:.|.||:.||||...|::.:  |.|.        ..::.:||.:||.:.:.:|:|
  Fly  1229 YM-RLLGYPAAKISILTTYNGQKHLIRDVI--NARCGNNPLIGWPHKITTVDKYQGQQNDYILIS 1290

  Fly   834 LVRSNISGRIGFLRQANRVCVALSRARWALYIVGNVTILKD------TFPKIWNPIVKRLKENNA 892
            |||:.   .:|.||...|:.||:||||..||:.|.|::.|:      ||..:..   :.||.:..
  Fly  1291 LVRTK---AVGHLRDVRRLVVAMSRARLGLYVFGRVSLFKNCLELQQTFKLLTQ---RPLKLSLV 1349

  Fly   893 IGEAFPT 899
            ..:.|||
  Fly  1350 PEDKFPT 1356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6204NP_651229.2 EEXXEc_NFX1 449..708 CDD:350694 75/346 (22%)
SF1_C_Upf1 710..888 CDD:350195 52/214 (24%)
CG31368NP_996198.2 Aquarius_N 33..815 CDD:435319 39/211 (18%)
EEXXQc_AQR 810..1168 CDD:350693 80/365 (22%)
SF1_C_Upf1 1156..1339 CDD:350195 52/204 (25%)

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