DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6204 and Znfx1

DIOPT Version :9

Sequence 1:NP_651229.2 Gene:CG6204 / 42877 FlyBaseID:FBgn0039165 Length:903 Species:Drosophila melanogaster
Sequence 2:NP_001376200.1 Gene:Znfx1 / 296384 RGDID:1306344 Length:1907 Species:Rattus norvegicus


Alignment Length:1149 Identity:287/1149 - (24%)
Similarity:463/1149 - (40%) Gaps:348/1149 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LLQGLEKSLKS----------LELQKNEEYIECPPSERKCPPSEVGEYVMQHTRFSLTELTNALK 70
            :.|.|.|:..|          |.:..|.:::      |.|.|:    ||:......:.::.|  :
  Rat   180 ICQVLRKACSSRIDRQSILHVLGILNNSKFL------RVCLPA----YVVGMITEPVPDIRN--Q 232

  Fly    71 MPA-IDMFLYFLSDKRDLFENQVLATDNVKRVGLFVDVL-WSLCELELGGFDEVFLSAFSRQTAL 133
            .|. |...:..|.|...:|     ...:|:...:.:.:| .||..|...|.|      ...:|. 
  Rat   233 YPEHISNIISLLQDLVSVF-----PASSVQETSMLISLLPTSLNALRASGVD------IEEETE- 285

  Fly   134 LDKIKNLLQAKAAVAKCDAESALILSHSKWMLLRAHKHGLLSHQGYELVELYKKLAPSFKSDMID 198
                |||.:.:|           |:.|    |....:.|.|....|.||:          :::..
  Rat   286 ----KNLEKVQA-----------IIKH----LQEKRREGTLRVDTYTLVQ----------AEVEG 321

  Fly   199 GLEAFTGNFSHNVKGLIYPTL-ETLLGKDATKAPNEEEDEGLVSDK---VVKYVNALRNLLREDF 259
            .:|::...       .||||. |..|.:.....||      ::|.|   ...|::....||||||
  Rat   322 EVESYRAM-------PIYPTYNEVHLDERPFLRPN------IISGKYESTAVYLDTHFRLLREDF 373

  Fly   260 LAPLVEFVQQLRSGTDVDELKQQGLLWSDVHLTLNPQFANAQ-RHSLVFLKVQF-TKESKNAYKT 322
            :.||.|.:.:|....:...|:::  .:.|:.:..:.:..... ..|.:..|||| ||..|  :..
  Rat   374 VRPLREGILKLLQSFEDQCLRKR--KFDDIRIYFDARIITPMCSASGIVYKVQFDTKPLK--FVR 434

  Fly   323 WLNS--IKSGTLLCLTTSLAFDDLILASVGYTEPEKLKEDCL-------SVQIVKQYNIGNAYNR 378
            |.||  :..|:|:|::.. .|:..:.|:|...|.|.|.:..:       |.|::......:::  
  Rat   435 WQNSKRLLYGSLVCMSKD-NFETFLFATVSNREHEDLCQGIVQLCFNEQSQQLLADVQPSDSF-- 496

  Fly   379 PLIMFQAPVFFEPYLRVHNYLSTCSTEKFPMGRYIVDGQMEIPPPAYMKPGVKLSF--------- 434
              :|.:...:||.|..|...|.....|..|..|.||:....:..|.|:..|.|..|         
  Rat   497 --LMVETTAYFEAYRHVLEGLQEVQEEDVPFQRNIVECDSYVREPRYLLMGGKYDFTPLIENPSA 559

  Fly   435 ----------------NMKPFTLDKLPEDLHLNESQKTAFKEALCREFSIIQGPPGTGKTHLSVQ 483
                            |:..|:...:.|.|:|::||..|.:.||.||.:|||||||||||::.::
  Rat   560 IRKSLRGAEVLRRSKINVLDFSQWPVKEALNLDDSQMKALQFALTRELAIIQGPPGTGKTYVGLK 624

  Fly   484 LVNSLIQNAKALGTG----PIIVLTYTNNSLDKFLVKI-SRYTQEILRFGNQSRDPQISKFNL-S 542
            :|.:|:.|.......    ||:|:.|||::||:||..| ......|:|.|.:|....:.:|.| .
  Rat   625 IVQALLTNKSVWQISAQKFPILVVCYTNHALDQFLEGIYGCQKTSIVRVGGRSNSEILKQFTLRE 689

  Fly   543 TTIKPEL---VPPRLKRIWWLVNCEYKEKFRNLQ------------------------------- 573
            ...|.|.   :|..|:|.:..:..|.||..:.||                               
  Rat   690 LRNKREFRRTLPMHLRRAYMNIVTEMKESEQKLQVGAQTLECTMHGVLREQHLEKYIAPQHWESL 754

  Fly   574 -------------------------GL----------------YANFDGSEESY----------- 586
                                     ||                .|..:|.||..           
  Rat   755 MNGPVQDADWLCVQPSKHSMIVEWLGLGVGSFTQSASPAGPENTAQAEGEEEEEGEEEGSLIEIE 819

  Fly   587 --------------------------------------------QDT--------LAAQE----- 594
                                                        ||.        .||:|     
  Rat   820 EEADLIQADRVIEEEEVVRPRRRKKEENGADQELAKMLLAMRLDQDVPGTTAGPEQAAEEWETQR 884

  Fly   595 ---------------KLNQV--------------------------------------------- 599
                           |||.:                                             
  Rat   885 SQKKKMKRRVKVELRKLNTITEAEASAIQDVWQLDLSSRWQLYRLWLQMYQSDTRRKILSYERQY 949

  Fly   600 ---AERIETLRMVFQFFLAREKDLLAMTTTCAARHNFLFRLLQSKCVLFEEAAEIQEAHIVACLT 661
               |||:..||:.....:.::..::.||||.||::..:.:.::.:.|:.|||||:.|||.:|.|:
  Rat   950 RTWAERMAELRLQEDLHILKDAQVVGMTTTGAAKYRQILQQVEPRIVIVEEAAEVLEAHTIATLS 1014

  Fly   662 PHTEHVILVGDHKQLQPFSGSRKVP-----QISLFERLIVAGLPFSRLNLQYRMRSCISELLVPS 721
            ...:|:||:|||:||:|.:....:.     ::||||||:...:||.|||.|:|||..|:.||.|.
  Rat  1015 KACQHLILIGDHQQLRPSANVYDLAKNFNLEVSLFERLVKVNVPFVRLNYQHRMRPEIARLLTPH 1079

  Fly   722 IYDELLCSESVKEYEDIRLMSKNLYFVQHNQPEHCMSD-MSIGNLYEAGVLAKLTEFLIQKAQYK 785
            ||.:|....||.:||.|:.:|.||:||:||.||..:.: .|..|.:||..:.:|.::|:.: :|.
  Rat  1080 IYQDLENHPSVLKYEQIKGVSSNLFFVEHNFPEQEIQEGKSHQNQHEAHFVVELCQYLLCQ-EYL 1143

  Fly   786 HSDIVILSPYNGQIECIKNALPQNYRSTVQVASVDSFQGLEANIVLLSLVRSNISGRIGFLRQAN 850
            .|.|.||:.|.||:.|::..:|....:.::|..||.:||.|.:::||||||||..|::|||:..|
  Rat  1144 PSQITILTTYTGQLFCLRKLMPVKTFAGIKVHVVDKYQGEENDVILLSLVRSNQEGKVGFLQIPN 1208

  Fly   851 RVCVALSRARWALYIVGNVTILKDTFPKIWNPIVKRLKENNAIG 894
            |:|||||||:..:|.:||:.:|...  .:|:.|:..|:||:.||
  Rat  1209 RICVALSRAKKGMYCIGNMQMLAKV--PLWSRIIHTLRENHQIG 1250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6204NP_651229.2 AAA_11 449..679 CDD:289831 93/441 (21%)
AAA_19 467..>513 CDD:289986 22/49 (45%)
UvrD_C_2 688..869 CDD:304668 81/181 (45%)
Znfx1NP_001376200.1 EEXXEc_NFX1 591..>674 CDD:350694 35/82 (43%)
AAA_11 <897..1031 CDD:404072 33/133 (25%)
EEXXEc_NFX1 <971..1066 CDD:350694 37/94 (39%)
SF1_C_Upf1 1068..1244 CDD:350195 72/178 (40%)
NF-X1-zinc-finger 1365..1411 CDD:100116
NF-X1-zinc-finger 1453..1497 CDD:100116
LELP1 1476..1553 CDD:405691
PRK03918 <1597..>1755 CDD:235175
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335247
Domainoid 1 1.000 155 1.000 Domainoid score I4155
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H10877
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D271662at2759
OrthoFinder 1 1.000 - - FOG0005665
OrthoInspector 1 1.000 - - oto96401
orthoMCL 1 0.900 - - OOG6_101077
Panther 1 1.100 - - LDO PTHR10887
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4066
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.850

Return to query results.
Submit another query.