DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6204 and Y53F4B.10

DIOPT Version :9

Sequence 1:NP_651229.2 Gene:CG6204 / 42877 FlyBaseID:FBgn0039165 Length:903 Species:Drosophila melanogaster
Sequence 2:NP_001366964.1 Gene:Y53F4B.10 / 190212 WormBaseID:WBGene00013157 Length:471 Species:Caenorhabditis elegans


Alignment Length:552 Identity:97/552 - (17%)
Similarity:167/552 - (30%) Gaps:240/552 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 DDWFDQDENKLLQGLEKSLKSLELQKN--------EEYIEC-----------------PPSERKC 45
            :|:: .|:..:.|..|..:|.|.|..|        .|.|.|                 ||....|
 Worm    79 EDYY-HDQQNVEQNSENPVKRLLLNTNLDDIQAFRNETIPCMKKPGRCHMRIPADSQRPPLSFFC 142

  Fly    46 ---PPSEVGEYVMQHTRFSLTELTNALKMPAIDMFLYFLSDKRDLF-------------ENQVLA 94
               |......||:.....||...:...::||        .|:.|||             |.|.:.
 Worm   143 GAKPSQPYALYVVAQGGTSLKCFSVFKELPA--------DDRPDLFSADLSCFSYDILSERQAVV 199

  Fly    95 TDNVKRVGLFVDVLWSLCELELGGFDEVFLSAFSRQTALLDKIKN----LLQAKAAVAKCDAESA 155
            :|.:  :|..: :::|| |:..|    |...::.|.:..:.|:::    .::..|.|.:|..:..
 Worm   200 SDFL--IGDLI-IVFSL-EVRYG----VPPDSYLRDSTHVLKLESHKYWSIEKFAVVQRCVTQPE 256

  Fly   156 LILSHSKWMLLRAHKHGLLSHQGYELVELYKKLAPSFKSD----MIDGLEAFTGNFSHNVKGLIY 216
            ....|.             ||               ||:|    :::.:          :..|..
 Worm   257 PFSVHQ-------------SH---------------FKADKRLILVNNI----------LTPLTV 283

  Fly   217 PTLETLLGKDATKAPNEEEDEGLVSDKVVKYVNALRNLLREDFLAPLVEFVQQLRSGTDVDELKQ 281
            ||  .|||:                        :.|.::|        .|:.|...|..:..|| 
 Worm   284 PT--KLLGE------------------------SCRGVVR--------AFLPQAAPGLTLSSLK- 313

  Fly   282 QGLLWSDV-----HL-----TLNPQFANAQRHSLVFLKVQFTKESKNAYKTWLNSIKSGTLLCLT 336
            .|:|:.:|     ||     .::||..:                        |..:.:|::|   
 Worm   314 PGVLYEEVRRRTAHLGSHWEAMSPQVLD------------------------LEVVDNGSML--- 351

  Fly   337 TSLAFDDLILASVGYTEPEKLKEDCLSVQIVKQYNIGNAYNRPLIMFQAPVFFEPYLRVHNYLST 401
                              .:|.|:|:.|..                       |....::....|
 Worm   352 ------------------SRLVEECIDVNT-----------------------EAIATLYEDRGT 375

  Fly   402 CST--EKFPMGRYIVDGQMEIPPPAY------MKPGVKLSFNMKPFTLDKLPED-LHLNESQKTA 457
            ..|  ||...|...|..|..|..|:|      .|.|.:.|       |:....| |.:.......
 Worm   376 HPTKVEKVTCGLRTVTIQFTIGTPSYSAAIRKWKKGTRCS-------LETAAGDILSVLVENAIP 433

  Fly   458 FKEALCREFSIIQGPPGTGKTHLSVQLVNSLI 489
            .|..:....|||       |:.:.|:::|:|:
 Worm   434 LKSRVIITASII-------KSRVDVRILNTLL 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6204NP_651229.2 AAA_11 449..679 CDD:289831 8/41 (20%)
AAA_19 467..>513 CDD:289986 7/23 (30%)
UvrD_C_2 688..869 CDD:304668
Y53F4B.10NP_001366964.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1112
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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