DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6204 and R03D7.2

DIOPT Version :9

Sequence 1:NP_651229.2 Gene:CG6204 / 42877 FlyBaseID:FBgn0039165 Length:903 Species:Drosophila melanogaster
Sequence 2:NP_001364577.1 Gene:R03D7.2 / 174682 WormBaseID:WBGene00010989 Length:390 Species:Caenorhabditis elegans


Alignment Length:310 Identity:79/310 - (25%)
Similarity:136/310 - (43%) Gaps:34/310 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   582 SEESYQDTLAAQEKL--NQVAERIETLRMVFQFFLAREKDLLAMTTTCAARHNFL---FRLLQSK 641
            :|:....||:|..||  ..:.:.:..||:    |:......|.:.|..|.:..|.   |..::.:
 Worm     3 NEDLINPTLSAAVKLPYTSIPKEMTILRV----FMNIHDPQLVIGTAAAIKLAFSQAPFLEIKDR 63

  Fly   642 --CVLFEEAAEIQEAHI--VACLTPHTEHVILVGDHKQLQPFSGS---RKVPQISLFERLIVA-- 697
              ....:||:::....:  :|.:.|.: .:|||||..||.|:...   .::.:.::.|.|.:|  
 Worm    64 FDITFIDEASQLALYVLGSLATMLPKS-RMILVGDMHQLPPYMEEALPAELKRAAIGEPLTLAVK 127

  Fly   698 --GLPFSRLNLQYRMRSCISELLVPSIYDELLCSE-----SVKEYEDIRLMSKN-LYFVQHNQPE 754
              ..|...|...:|....|:|:|....|...|.|.     .:...:.:.|.|:: :.||.:..|:
 Worm   128 GRRWPSMHLTRVHRCPKMITEVLGDLFYGNTLTSSKPGVTDIPVLKAMGLPSRHPMVFVNYTSPQ 192

  Fly   755 HCMSDMSIGNLYEAGVLAKLTEFLIQKAQYKHSDI--VILSPYNGQIECIKNALPQNYRSTVQVA 817
            ..:. .|..|..||....:|.|.|.:.|...:..|  .||:.|..|...:.:..    ...|.|.
 Worm   193 TAVG-KSFSNEGEARYALQLVEALTRYASTANKKITAAILNFYGAQYSYVYSMA----EDEVTVN 252

  Fly   818 SVDSFQGLEANIVLLSLVRSNISGRIGFLRQANRVCVALSRARWALYIVG 867
            ::|..||.|.::.::.|.||:...|..||..|||:.|||||.:.|..|:|
 Worm   253 TIDGCQGQEYDVTIVLLTRSDPYERSKFLVNANRINVALSRPKIATVIIG 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6204NP_651229.2 AAA_11 449..679 CDD:289831 25/105 (24%)
AAA_19 467..>513 CDD:289986
UvrD_C_2 688..869 CDD:304668 53/192 (28%)
R03D7.2NP_001364577.1 DNA2 <19..302 CDD:224037 72/292 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1112
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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