Protein Alignment CHORD and chordc1a

DIOPT Version :9

• Sequence 1: NP_651226.1
• Gene: CHORD / 42874
• FlyBaseID: FBgn0029503
• Length: 354
• Species: Drosophila melanogaster
• Sequence 2: NP_001020346.1
• Gene: chordc1a / 573996
• ZFINID: ZDB-GENE-050626-79
• Length: 339
• Species: Danio rerio
• Alignment Length: 322
• Identity: 139/322 - (43%)
• Similarity: 198/322 - (61%)
• Gaps: 23/322 - (7%)

  Fly     4 CYNRGCGQLFDPQTNNDESCRHHPGEPFFHDAYKGWSCCNKKSVDFTEFLNIKGCTLAKHSNVKP 68
            |||:||||.|||:.|.|:||.||||.|.||||.||||||.:::.||::||:|.|||...|:..||
Zfish     5 CYNKGCGQRFDPENNPDDSCTHHPGVPVFHDALKGWSCCKRRTTDFSDFLSIAGCTKGPHNKEKP 69

  Fly    69 PEPEKP-VKDESDKDE-----------VIEVRAPIREALPRPPIDSPLTVIQPTVAPALKDMVFA 121
            .||.|| ||...:|.|           :|:...|: |.:.||..|.||..:|..|||:|...:..
Zfish    70 LEPVKPDVKVSGEKKELEDLKPKFNEYIIQAPKPV-EFIQRPSADEPLVNLQRKVAPSLNQALEK 133

  Fly   122 VK-------TPAAQKSSDAIEVGTTCKNNGCTYSFTGNSSDFGECTYHPGVPIFHEGMKFWSCCQ 179
            ::       ....::....::|||.|||.||..::.|..:|...|.||.||||||||||:||||:
Zfish   134 LRLAEEANHIEEKEEEGSEVKVGTACKNGGCMKTYNGPKTDEEMCLYHSGVPIFHEGMKYWSCCK 198

  Fly   180 KRTSDFSQFMAQKGCTYGEHKWVKENDDKKVVQCRYDWHQTATNVVMAIYAKKYDYSQSVIELNP 244
            ::||||:.|::|:||..|.|:|.|:..: ||..||:|||||.:.|.::||||..:.....:|.|.
Zfish   199 RKTSDFNTFLSQEGCNKGSHQWRKDTGN-KVAPCRFDWHQTGSQVTLSIYAKNSNPQLCSVEANS 262

  Fly   245 IRLHVNLVFPEQDNARFDLDLELRGIVNVSNASAHMYGTKVEIKLPKLEPGSWSNLNFPNKK 306
            :.|.|:|:|  :....|:|.|.|.|:::||.:..:|..:|||:.:.|.||.||:.|:.|..|
Zfish   263 VSLKVHLIF--EGEKEFELSLSLWGVIDVSKSVVNMMASKVEVVMKKAEPMSWARLDLPPPK 322

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CHORD	NP_651226.1	CHORD	3..63	CDD:282781	37/58 (64%)
		CHORD	138..199	CDD:282781	34/60 (57%)
		p23_melusin_like	213..301	CDD:107238	34/87 (39%)
chordc1a	NP_001020346.1	CHORD	3..64	CDD:282781	37/58 (64%)
		CHORD	157..218	CDD:282781	34/60 (57%)
		p23_melusin_like	231..317	CDD:107238	34/87 (39%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	102	1.000	Domainoid score	I6787
eggNOG	1	0.900	-	-		E1_KOG1667
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H8111
Inparanoid	1	1.050	313	1.000	Inparanoid score	I2556
OMA	1	1.010	-	-		QHG51840
OrthoDB	1	1.010	-	-		D1163528at2759
OrthoFinder	1	1.000	-	-		FOG0002255
OrthoInspector	1	1.000	-	-		otm26435
orthoMCL	1	0.900	-	-		OOG6_102230
Panther	1	1.100	-	-	O	PTHR12621
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X1489
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
ZFIN	0	0.000	Not matched by this tool.
	15	14.840