DRSC/TRiP Functional Genomics Resources

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Protein Alignment mora and chordc1

DIOPT Version :10

Sequence 1:NP_651226.1 Gene:mora / 42874 FlyBaseID:FBgn0029503 Length:354 Species:Drosophila melanogaster
Sequence 2:XP_031751712.1 Gene:chordc1 / 448329 XenbaseID:XB-GENE-962949 Length:335 Species:Xenopus tropicalis


Alignment Length:334 Identity:147/334 - (44%)
Similarity:214/334 - (64%) Gaps:20/334 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 CYNRGCGQLFDPQTNNDESCRHHPGEPFFHDAYKGWSCCNKKSVDFTEFLNIKGCTLAKHSNVKP 68
            ||||||||.:||::|:|:||.:|||.|.||||.||||||.:::.||::||:|.|||...|||.||
 Frog     5 CYNRGCGQRYDPESNSDDSCTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCTKGLHSNEKP 69

  Fly    69 PEPEKP-VKDESDKDE-----------VIEVRAPIREALPRPPIDSPLTVIQPTVAPALKDMVFA 121
            |||.|| ||..|:|.|           :|:...|| |.:.||..|.|:..:|..::.:||..:..
 Frog    70 PEPVKPEVKTTSEKKELADCKPKFNEHIIQAPKPI-ECINRPSSDEPMVKLQLKISASLKQALDK 133

  Fly   122 VK-----TPAAQKSSDAIEVGTTCKNNGCTYSFTGNSSDFGECTYHPGVPIFHEGMKFWSCCQKR 181
            :|     ....::.|..|::||:|||.||..:|.|..|:...|.||.||||||||||:||||:::
 Frog   134 LKLSENDKAVTEEDSGEIKIGTSCKNGGCLKTFAGPQSNEEVCQYHNGVPIFHEGMKYWSCCRRK 198

  Fly   182 TSDFSQFMAQKGCTYGEHKWVKENDDKKVVQCRYDWHQTATNVVMAIYAKKYDYSQSVIELNPIR 246
            ||||:.|::|:|||.|.|.|.|::|.||||.||:|||||.:.|.::||||......|.:|.|...
 Frog   199 TSDFNTFLSQEGCTKGTHLWTKKDDGKKVVPCRHDWHQTGSGVTISIYAKNSLPELSYVEANSTI 263

  Fly   247 LHVNLVFPEQDNARFDLDLELRGIVNVSNASAHMYGTKVEIKLPKLEPGSWSNLNFPNKKLPVVK 311
            :::.:||  :....|..:::|.|:|:|:.:...:..|||||.|.|.||.:|:.|..|.:...:.|
 Frog   264 VNIQVVF--EGEKTFQQNVQLWGVVDVAKSYVSLTATKVEIFLKKAEPMTWARLELPQQAPSLPK 326

  Fly   312 KSQVEEKKK 320
            :::..|::|
 Frog   327 QNETSEEQK 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
moraNP_651226.1 CHORD 3..63 CDD:461502 36/58 (62%)
CHORD 138..199 CDD:461502 36/60 (60%)
p23_melusin_like 213..301 CDD:107238 32/87 (37%)
chordc1XP_031751712.1 CHORD 3..64 CDD:461502 36/58 (62%)
CHORD 155..216 CDD:461502 36/60 (60%)
p23_melusin_like 230..316 CDD:107238 32/87 (37%)

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