DRSC/TRiP Functional Genomics Resources

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Protein Alignment CHORD and Itgb1bp2

DIOPT Version :9

Sequence 1:NP_651226.1 Gene:CHORD / 42874 FlyBaseID:FBgn0029503 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_038740.1 Gene:Itgb1bp2 / 26549 MGIID:1353420 Length:350 Species:Mus musculus


Alignment Length:343 Identity:135/343 - (39%)
Similarity:188/343 - (54%) Gaps:25/343 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 CYNRGCGQLFDPQTNNDESCRHHPGEPFFHDAYKGWSCCNKKSVDFTEFLNIKGCTLAKHSNVK- 67
            |||:||||.|||.||..:|||:|||.|.||||.||||||.|::|||:|||||||||:..|...| 
Mouse     5 CYNKGCGQHFDPNTNLPDSCRYHPGVPIFHDALKGWSCCRKRTVDFSEFLNIKGCTVGLHCAEKL 69

  Fly    68 ---PPEPEKPVKDESDKDEVIEVRAPIREALPRPPIDSPLTVIQPTVAPALKDMVFAV------- 122
               ||:||.|......:.:.:.......|.|.|   :.|.:.:.|.:.|.|......|       
Mouse    70 PEVPPQPEGPATSSLQEQKPLNTIPKSAETLFR---ERPKSEMPPKLLPLLISQALGVALEQKEL 131

  Fly   123 -KTPAAQKSSDAIEVGTTCKNNGCTYSFTGNSSDFGECTYHPGVPIFHEGMKFWSCCQKRTSDFS 186
             :.|.|...:..|..|::|:|.||...:.|..||...||||||.|.||||||.||||..:|.||.
Mouse   132 DQEPGAGLDNSLIWTGSSCQNPGCDAVYQGPESDATPCTYHPGAPRFHEGMKSWSCCGIQTLDFG 196

  Fly   187 QFMAQKGCTYGEHKWVKENDDKKVVQCRYDWHQTATNVVMAIYAKKYDYSQSVIELNPIRLHVNL 251
            .|:||.||..|.|.|.|:    ....||:|||||.:.||:.:|.:....:.:.::.:...|||::
Mouse   197 AFLAQPGCRVGRHDWAKQ----LPASCRHDWHQTDSVVVLTVYGQIPLPAFNWVKASQTELHVHI 257

  Fly   252 VFPEQDNARFDLDLELRGIVNVSNASAHMYGTKVEIKLPKLEPGSWSNLNFPNKKLPVVKKSQVE 316
            ||  ..|..|...::|.|::||..:|..:..::|||.|.|.:||||:.|..|:......:...:.
Mouse   258 VF--DGNRVFQAQMKLWGVINVEQSSVSLMPSRVEISLVKADPGSWAQLEHPDSLAEKARAGVLL 320

  Fly   317 EKKKQEESDEEFFDLDDI 334
            |..::|..|.:    ||:
Mouse   321 EMDEEESEDSD----DDL 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CHORDNP_651226.1 CHORD 3..63 CDD:282781 42/58 (72%)
CHORD 138..199 CDD:282781 33/60 (55%)
p23_melusin_like 213..301 CDD:107238 31/87 (36%)
Itgb1bp2NP_038740.1 CHORD 3..64 CDD:282781 42/58 (72%)
SH3-binding. /evidence=ECO:0000255 28..31 2/2 (100%)
SH3-binding. /evidence=ECO:0000255 70..79 4/8 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 72..92 5/19 (26%)
CHORD 149..209 CDD:282781 33/59 (56%)
SH2-binding. /evidence=ECO:0000255 159..162 0/2 (0%)
SH3-binding. /evidence=ECO:0000255 173..176 2/2 (100%)
p23_melusin_like 219..305 CDD:107238 31/87 (36%)
SH2-binding. /evidence=ECO:0000255 235..238 1/2 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 317..350 5/22 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167830960
Domainoid 1 1.000 109 1.000 Domainoid score I6377
eggNOG 1 0.900 - - E1_KOG1667
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG51840
OrthoDB 1 1.010 - - D1163528at2759
OrthoFinder 1 1.000 - - FOG0002255
OrthoInspector 1 1.000 - - otm43934
orthoMCL 1 0.900 - - OOG6_102230
Panther 1 1.100 - - O PTHR12621
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1489
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.720

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