DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5510 and Lman1

DIOPT Version :10

Sequence 1:NP_651224.1 Gene:CG5510 / 42872 FlyBaseID:FBgn0039160 Length:329 Species:Drosophila melanogaster
Sequence 2:NP_081676.1 Gene:Lman1 / 70361 MGIID:1917611 Length:517 Species:Mus musculus


Alignment Length:220 Identity:81/220 - (36%)
Similarity:124/220 - (56%) Gaps:12/220 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 FQGVGVI-----LPHWDFLGNTMVTSNYIRLTPDLQSKSGALWNYSPVMTRNWEVHVGFKVHGKG 104
            |:|..::     :|.|...||.:.:::.||:.|.|:|:.|::|..:.....||||.|.|:|.|:|
Mouse    60 FKGPHLVQSDGTVPFWAHAGNAIPSADQIRIAPSLKSQRGSVWTKAKAAFENWEVEVTFRVTGRG 124

  Fly   105 TELFGDGFAIWYTKERMQTGPVFGSKDHFSGLAIILDTYSNHNGPHNHQHPYLSAMVNNGSWSYD 169
             .:..||.|||||:.:...||||||.|.::|:.|..|::.|....:|   |.:..:.|||..:||
Mouse   125 -RIGADGLAIWYTENQGLDGPVFGSADTWNGVGIFFDSFDNDGKKNN---PAIVVIGNNGQINYD 185

  Fly   170 HDRDGTHTQLAGCEVRFRNVEYETLVSIRYENDILSVSTD---LENRNEWKNCFVVANVELPTGY 231
            |..||....||.|:..|||..|.....|.|....|:|..:   ..::|:::.|..|.|:.:||..
Mouse   186 HQNDGATQALASCQRDFRNKPYPVRAKITYYQKTLTVMINNGFTPDKNDYEFCAKVENMVIPTQG 250

  Fly   232 HFGMSATTGDLSDNHDIHSFKFYDL 256
            |||:||.||.|:|:||:.||..:.|
Mouse   251 HFGISAATGGLADDHDVLSFLTFQL 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5510NP_651224.1 lectin_VIP36_VIPL 34..280 CDD:173889 81/220 (37%)
Lman1NP_081676.1 lectin_ERGIC-53_ERGL 52..276 CDD:173890 81/220 (37%)
Mediates interaction with RAB3GAP1, RAB3GAP2 and UBXN6. /evidence=ECO:0000250|UniProtKB:P49257 506..517
ER export motif. /evidence=ECO:0000250 516..517
Blue background indicates that the domain is not in the aligned region.

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