DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5510 and Lman2

DIOPT Version :10

Sequence 1:NP_651224.1 Gene:CG5510 / 42872 FlyBaseID:FBgn0039160 Length:329 Species:Drosophila melanogaster
Sequence 2:NP_080104.2 Gene:Lman2 / 66890 MGIID:1914140 Length:358 Species:Mus musculus


Alignment Length:242 Identity:50/242 - (20%)
Similarity:81/242 - (33%) Gaps:89/242 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   212 PLIMQACANMFSEYMCSVRF---DYNDQGFMSIVRNFDEIFWEINQGYAVDFLPWLA-------- 265
            |.|||....:...|...:|.   ..::.|..|:    :.|.|.||:.   ...||:.        
Mouse   306 PRIMQKWLGLIPAYALHLRVVLAQASESGLTSL----NVITWAINEH---PHFPWVLVRRMYAEQ 363

  Fly   266 --------------PFY-------------HKHMSKLT-RWSAEIRDFILERIVNEREQTLGDDD 302
                          |:|             .:|::.|. |....:.|.:|||.     |...||.
Mouse   364 WDNAQRAIRLVENNPYYGYRRDLTAVRSTQFRHLAALCGRLLIALGDRLLERY-----QGFVDDK 423

  Fly   303 TE----RDFADALLKSL-RLDPSVTRDTIMYMLEDFLGGHSAI--------GNLVMLALGYIAKH 354
            ..    |...||.:.:. |...::.|.    |.|:.:..|:.:        .|:.:||  .|..|
Mouse   424 LRVHEWRRMIDAYVNAHGREGANIERP----MSEEEIDHHADMMQSVSQYPANIEVLA--RIDGH 482

  Fly   355 ---PEVG-------------HRIQR-EIDRITERGKRNVTLYDTESM 384
               |::|             ||::| :.|.:...||...  |:.|.|
Mouse   483 PDRPDIGLHGGGPQFRGGPRHRVRRDDDDNVGGGGKAGA--YNGEEM 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5510NP_651224.1 lectin_VIP36_VIPL 34..280 CDD:173889 19/106 (18%)
Lman2NP_080104.2 lectin_VIP36_VIPL 55..303 CDD:173889
Blue background indicates that the domain is not in the aligned region.

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