DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5510 and lman2

DIOPT Version :10

Sequence 1:NP_651224.1 Gene:CG5510 / 42872 FlyBaseID:FBgn0039160 Length:329 Species:Drosophila melanogaster
Sequence 2:NP_001075216.2 Gene:lman2 / 557960 ZFINID:ZDB-GENE-070209-149 Length:354 Species:Danio rerio


Alignment Length:333 Identity:149/333 - (44%)
Similarity:211/333 - (63%) Gaps:14/333 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 CSLALLALLVAPFVVLGEDM-PREPDYMKREHSLVRPFQGVGVI-LPHWDFLGNTMVTSNYIRLT 71
            |...||.|.:..|..:..|: ....:::||||||::|:||||.. ...|||.|:|:|||.|:|||
Zfish    24 CHKILLLLWLLHFSSVYSDITDGNAEHLKREHSLIKPYQGVGSSPSSQWDFWGSTLVTSQYVRLT 88

  Fly    72 PDLQSKSGALWNYSPVMTRNWEVHVGFKVHGKGTE-LFGDGFAIWYTKERMQTGPVFGSKDHFSG 135
            ||.:||.|::||..|...::||:||.||:||.|.: |.|||||:||||||:..|||||::|||.|
Zfish    89 PDERSKQGSIWNTVPCYLKDWEMHVQFKIHGSGKKNLHGDGFAMWYTKERLHPGPVFGNQDHFVG 153

  Fly   136 LAIILDTYSNHNGPHNHQHPYLSAMVNNGSWSYDHDRDGTHTQLAGCEVRFRNVEYETLVSIRYE 200
            |||.:||:.|.....:...||:||||||||..|:|.:||..|:|.||.|..||.|::|.::|||.
Zfish   154 LAIFVDTFRNDLQGMDRSFPYISAMVNNGSLPYEHGKDGRSTELGGCSVEVRNKEHDTYLAIRYS 218

  Fly   201 NDILSVSTDLENRNEWKNCFVVANVELPTGYHFGMSATTGDLSDNHDIHSFKFYDLDLNVNHDEI 265
            ...|::..|::::|:||.|..:..|.|||||:||.||.||||||||||.|.|.|.|.:....:|.
Zfish   219 KGRLTIMVDVDDQNDWKECVDIGGVRLPTGYYFGASAATGDLSDNHDIISMKMYQLMVEHTLEED 283

  Fly   266 IRR-SNIIPNAKTFEPPREHKEDPKPGMSNA-----KIFFILLFV---VVVAAAVAIFAISYFKD 321
            .:. :.|.|:....:.|:::.:||.....::     |:|.:||..   :||.|.|.  |:.:.|.
Zfish   284 SQDWTKIEPSVSLLKSPKDNIDDPTGNFRSSPLTGWKVFLLLLCALLGIVVCAVVG--AVVFQKR 346

  Fly   322 RNARKRFY 329
            :...||||
Zfish   347 QERNKRFY 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5510NP_651224.1 lectin_VIP36_VIPL 34..280 CDD:173889 126/248 (51%)
lman2NP_001075216.2 lectin_VIP36_VIPL 50..299 CDD:173889 126/248 (51%)

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