DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5510 and LMAN1

DIOPT Version :10

Sequence 1:NP_651224.1 Gene:CG5510 / 42872 FlyBaseID:FBgn0039160 Length:329 Species:Drosophila melanogaster
Sequence 2:NP_005561.1 Gene:LMAN1 / 3998 HGNCID:6631 Length:510 Species:Homo sapiens


Alignment Length:254 Identity:85/254 - (33%)
Similarity:127/254 - (50%) Gaps:36/254 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 FQGVGVI-----LPHWDFLGNTMVTSNYIRLTPDLQSKSGALWNYSPVMTRNWEVHVGFKVHGKG 104
            |:|..::     :|.|...||.:.:|:.||:.|.|:|:.|::|..:.....||||.|.|:|.|:|
Human    52 FKGPHLVQSDGTVPFWAHAGNAIPSSDQIRVAPSLKSQRGSVWTKTKAAFENWEVEVTFRVTGRG 116

  Fly   105 TELFGDGFAIWYTKERMQTGPVFGSKDHFSGLAIILDTYSNHNGPHNHQHPYLSAMVNNGSWSYD 169
             .:..||.||||.:.:...||||||.|.::|:.|..|::.|....:|   |.:..:.|||...||
Human   117 -RIGADGLAIWYAENQGLEGPVFGSADLWNGVGIFFDSFDNDGKKNN---PAIVIIGNNGQIHYD 177

  Fly   170 HDRDGTHTQLAGCEVRFRNVEYETLVSIRYENDILSVSTD---LENRNEWKNCFVVANVELPTGY 231
            |..||....||.|:..|||..|.....|.|..:.|:|..:   ..::|:::.|..|.|:.:|...
Human   178 HQNDGASQALASCQRDFRNKPYPVRAKITYYQNTLTVMINNGFTPDKNDYEFCAKVENMIIPAQG 242

  Fly   232 HFGMSATTGDLSDNHDIHSFKFYDLDLNVNHDEIIRRSNIIPNAKTFEPPREHKEDPKP 290
            |||:||.||.|:|:||:.||                        .||:.....||.|.|
Human   243 HFGISAATGGLADDHDVLSF------------------------LTFQLTEPGKEPPTP 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5510NP_651224.1 lectin_VIP36_VIPL 34..280 CDD:173889 81/242 (33%)
LMAN1NP_005561.1 lectin_ERGIC-53_ERGL 44..268 CDD:173890 81/243 (33%)
Mediates interaction with RAB3GAP1, RAB3GAP2 and UBXN6. /evidence=ECO:0000269|PubMed:22337587 499..510
ER export motif 509..510
Blue background indicates that the domain is not in the aligned region.

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