DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5510 and Lman1l

DIOPT Version :10

Sequence 1:NP_651224.1 Gene:CG5510 / 42872 FlyBaseID:FBgn0039160 Length:329 Species:Drosophila melanogaster
Sequence 2:XP_063121191.1 Gene:Lman1l / 300743 RGDID:1310538 Length:551 Species:Rattus norvegicus


Alignment Length:257 Identity:80/257 - (31%)
Similarity:121/257 - (47%) Gaps:23/257 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 SLALLALLVAPFVVLGEDMPREPDYMKREHSLVRPFQG-----VGVILPHWDFLGNTMVTSNYIR 69
            ||.||:||:|   :...:....|...:.|:.|  .|:|     .|..:|.|...|:.:.....:|
  Rat    57 SLCLLSLLLA---LHSAERSYPPPQRRFEYKL--SFKGPRLAVPGAGIPFWSHHGDAIPGLEEVR 116

  Fly    70 LTPDLQSKSGALWNYSPVMTRNWEVHVGFKVHGKGTELFGD-GFAIWYTKERMQTGPVFGSKDHF 133
            |.|.::::|||:|:...|...:|||.:..:|.|.|..  |. |.|:||||:|.|.|.|......:
  Rat   117 LVPSMKNRSGAVWSEISVSFPSWEVEMQMRVTGPGRR--GALGVAMWYTKDRDQVGSVVEGLASW 179

  Fly   134 SGLAIILDTYSN--HNGPHNHQHPYLSAMVNNGSWSYDHDRDGTHTQLAGCEVRFRNVEYETLVS 196
            .|:.|..|:.||  .||      |.:..:.::|....:...|||..:|..|...|||..:.....
  Rat   180 DGIGIYFDSSSNDVQNG------PAIRVLASDGHDLQEQFGDGTVRELGSCLRDFRNRPHPFRAR 238

  Fly   197 IRYENDIL--SVSTDLENRNEWKNCFVVANVELPTGYHFGMSATTGDLSDNHDIHSFKFYDL 256
            |.|....|  |:|..|...:..:.|..|..:.|..|..||:||.|..|:|:||:.||..:.|
  Rat   239 ITYWRQRLRVSLSGGLTPNDPEEVCVDVEPLLLAPGGFFGVSAATSTLADDHDVLSFLTFSL 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5510NP_651224.1 lectin_VIP36_VIPL 34..280 CDD:173889 72/233 (31%)
Lman1lXP_063121191.1 None

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