DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5510 and Lman2

DIOPT Version :10

Sequence 1:NP_651224.1 Gene:CG5510 / 42872 FlyBaseID:FBgn0039160 Length:329 Species:Drosophila melanogaster
Sequence 2:NP_001108496.1 Gene:Lman2 / 290994 RGDID:1308965 Length:358 Species:Rattus norvegicus


Alignment Length:328 Identity:153/328 - (46%)
Similarity:213/328 - (64%) Gaps:19/328 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LLALLVAPFVVLGEDMPREPDYMKREHSLVRPFQGVG-VILPHWDFLGNTMVTSNYIRLTPDLQS 76
            ||..|||..:..|..     :::||||||::|:|||| ..:|.|||.|:||:||.|:|||||.:|
  Rat    39 LLLGLVAADITDGNS-----EHLKREHSLIKPYQGVGSSSMPLWDFQGSTMLTSQYVRLTPDERS 98

  Fly    77 KSGALWNYSPVMTRNWEVHVGFKVHGKGTE-LFGDGFAIWYTKERMQTGPVFGSKDHFSGLAIIL 140
            |.|::||:.|...::||:||.|||||.|.: |.|||.|:|||::|:..||||||||:|.|||:.|
  Rat    99 KEGSIWNHQPCFLKDWEMHVHFKVHGTGKKNLHGDGIALWYTRDRLVPGPVFGSKDNFHGLAVFL 163

  Fly   141 DTYSNHNGPHNHQHPYLSAMVNNGSWSYDHDRDGTHTQLAGCEVRFRNVEYETLVSIRYENDILS 205
            |||.| :.......||:|.||||||.||||.:||..::||||...|||.:::|.:::||....|:
  Rat   164 DTYPN-DETTERVFPYISVMVNNGSLSYDHSKDGRWSELAGCTADFRNRDHDTFLAVRYSRGRLT 227

  Fly   206 VSTDLENRNEWKNCFVVANVELPTGYHFGMSATTGDLSDNHDIHSFKFYDLDL-NVNHDEIIRRS 269
            |.||||::||||||..|..|.|||||:||.||.|||||||||:.|.|.:.|.: ....:|.|..:
  Rat   228 VMTDLEDKNEWKNCIDVTGVRLPTGYYFGASAGTGDLSDNHDLISIKLFQLTVERTPEEESIDWT 292

  Fly   270 NIIPNAKTFEPPREHKEDPKPG-----MSNAKIFFILLFV---VVVAAAVAIFAISYFKDRNARK 326
            .|.|.....:.|:::.:||...     ::..::|.:||..   ::|.|.|.  |:.:.|.:...|
  Rat   293 KIEPGVNFLKSPKDNVDDPTGNFRGGPLTGWRVFLLLLCALLGIIVCAVVG--AVVFQKRQERNK 355

  Fly   327 RFY 329
            |||
  Rat   356 RFY 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5510NP_651224.1 lectin_VIP36_VIPL 34..280 CDD:173889 132/248 (53%)
Lman2NP_001108496.1 lectin_VIP36_VIPL 55..303 CDD:173889 132/248 (53%)

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