DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5510 and emp46

DIOPT Version :10

Sequence 1:NP_651224.1 Gene:CG5510 / 42872 FlyBaseID:FBgn0039160 Length:329 Species:Drosophila melanogaster
Sequence 2:NP_596105.1 Gene:emp46 / 2540877 PomBaseID:SPBC4F6.05C Length:384 Species:Schizosaccharomyces pombe


Alignment Length:241 Identity:62/241 - (25%)
Similarity:100/241 - (41%) Gaps:30/241 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 HSLVRPFQGVGVILPHWDFLGNTMVTSNYIRLT--PDLQSKSGALWNYSPVMTRNWEVHVGFKVH 101
            |||      ...|...|.:.|:....|.|:.||  ...:::||:||:.|.:....|::...|..|
pombe    29 HSL------SNAIPVEWKWYGSVDEDSGYVYLTSKDSNEARSGSLWSTSVLRQVGWQLSTSFVAH 87

  Fly   102 GKGTELFGDGFAIWYTKERMQTGPVFGSKDHFSGLAIILDTYSNHNGPHNHQHPYLSAMVNNGSW 166
            ....|  ...||||||......|||||:.|.:.||.|..:.  :..|     ..::...:|:.|:
pombe    88 VSENE--NTFFAIWYTSAVGSEGPVFGASDKWDGLLISQEI--DQTG-----KIFVRGYLNDKSF 143

  Fly   167 SYDHDRDGTHTQLAGCEVRFRNVEYETLVSIRYENDILSVSTDLENRNEWKNCFVVANVELPTGY 231
            ......|......|.|.:. .:.|....:.::|.:     .:.||.....|.||.|.:|.||.||
pombe   144 ELAQFTDPDLPPFAKCTIE-SSPEALNNIILKYGD-----QSGLELFVNDKPCFQVKDVILPQGY 202

  Fly   232 HFGMSATTGDLSDNHDIHSFKFYDLDLNVNHDEIIRRSNIIPNAKT 277
            :||:|:.:....|...:.       :||:...:.....|:.|.:.|
pombe   203 YFGVSSQSTSAKDLVALS-------NLNILPPDTSNNENLNPTSNT 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5510NP_651224.1 lectin_VIP36_VIPL 34..280 CDD:173889 62/241 (26%)
emp46NP_596105.1 Lectin_leg-like 23..229 CDD:397453 59/227 (26%)

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