DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5510 and lman1

DIOPT Version :10

Sequence 1:NP_651224.1 Gene:CG5510 / 42872 FlyBaseID:FBgn0039160 Length:329 Species:Drosophila melanogaster
Sequence 2:NP_001234922.2 Gene:lman1 / 100494337 XenbaseID:XB-GENE-492680 Length:511 Species:Xenopus tropicalis


Alignment Length:286 Identity:93/286 - (32%)
Similarity:144/286 - (50%) Gaps:38/286 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LALLALLVAPFVVLGEDMP-REPDYMKREHSLVRPF--QGVGVILPHWDFLGNTMVTSNYIRLTP 72
            |.||:|:.|..|...:|.| |..:|   ::|...|:  |..|.: |.|...||.:.:::.||:||
 Frog    22 LWLLSLVGANEVQSAQDTPHRRFEY---KYSFKGPYLVQSDGSV-PFWSHTGNAIPSADQIRITP 82

  Fly    73 DLQSKSGALWNYSPVMTRNWEVHVGFKVHGKGTELFGDGFAIWYTKERMQTGPVFGSKDHFSGLA 137
            .|:|:.|::|..:....:|||:.|.|::.|:| .:..||.|||||..:...|.|:|:.|.::|:.
 Frog    83 SLKSQKGSVWTKAIANFQNWELEVTFRITGRG-RIGADGLAIWYTAAQGLEGDVYGAADSWNGVG 146

  Fly   138 IILDTYSNHNGPHNHQHPYLSAMVNNGSWSYDHDRDGTHTQLAGCEVRFRNVEYETLVSIRYEND 202
            |..|::.|....:|   |.:.|:.|||...|||..||....||.|...|||..|.....|.|...
 Frog   147 IFFDSFDNDGKKNN---PAILAVGNNGKLQYDHQNDGATQALASCLRDFRNKPYPVRAKITYYKK 208

  Fly   203 ILSVSTD---LENRNEWKNCFVVANVELPTGYHFGMSATTGDLSDNHDIHSFKFYDLDLNVNHDE 264
            ||::..:   ..::.:::.|..|.|:.||:..:||:||.||.|:|:||:.||             
 Frog   209 ILTIMINNGFTPDKEDYEFCAKVENMILPSQGYFGISAATGGLADDHDVLSF------------- 260

  Fly   265 IIRRSNIIPNAKTFEPPREHKEDPKP 290
                       .||:.....||.|.|
 Frog   261 -----------LTFQLTEPGKEAPPP 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5510NP_651224.1 lectin_VIP36_VIPL 34..280 CDD:173889 80/250 (32%)
lman1NP_001234922.2 lectin_ERGIC-53_ERGL 42..266 CDD:173890 81/255 (32%)
HEC1 <282..459 CDD:444066
Blue background indicates that the domain is not in the aligned region.

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