DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6178 and PCS60

DIOPT Version :9

Sequence 1:NP_651221.1 Gene:CG6178 / 42867 FlyBaseID:FBgn0039156 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_009781.3 Gene:PCS60 / 852523 SGDID:S000000426 Length:543 Species:Saccharomyces cerevisiae


Alignment Length:500 Identity:137/500 - (27%)
Similarity:241/500 - (48%) Gaps:44/500 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 VKQNDVVGLSSENSVNFALAMFAGLAVGATV-APLNVTYSDREVDHAINLSKPKIIF----ASKI 133
            |.:.|.|.:|..|.:.|.:| |.|..:.|.: ||||..|.::|.:..:|..|.|.|.    .:|:
Yeast    59 VFRQDTVAISMRNGLEFIVA-FLGATMDAKIGAPLNPNYKEKEFNFYLNDLKSKAICVPKGTTKL 122

  Fly   134 TIDRVAKVASKNKFVKGIIALSGTSKKFKNIYDL-------KEL----MEDEKFKTQPDFTSPAA 187
            ....:.|.||  .|...|:.|:..:.:|:..||:       |.:    :.:.||........|..
Yeast   123 QSSEILKSAS--TFGCFIVELAFDATRFRVEYDIYSPEDNYKRVIYRSLNNAKFVNTNPVKFPGF 185

  Fly   188 NKDEDVSLIVCSSGTTGLPKGVQLTQMNLL-ATLDSQIQPTVIPMEEVTLLTVIPWFHAFGCL-T 250
            .:..||:||:.:||||..||.|.|..:|:: :||:......:.|::.  ...|:|.||..|.: .
Yeast   186 ARSSDVALILHTSGTTSTPKTVPLLHLNIVRSTLNIANTYKLTPLDR--SYVVMPLFHVHGLIGV 248

  Fly   251 LITTACVGARLVYLPKFEEKLFLSAIEKYRVMMAFMVPPLMVFLAKHPIVDKYDLSSLMVLLCGA 315
            |::|......:|....|..|||.....||.......||.:.:.:...|..:.:. ....:..|.:
Yeast   249 LLSTFRTQGSVVVPDGFHPKLFWDQFVKYNCNWFSCVPTISMIMLNMPKPNPFP-HIRFIRSCSS 312

  Fly   316 APLSRETEDQIKERIGVPFIRQGYGLSESTLSVLVQN--DEFCKPGSVGVLKVGIYAKVIDPDTG 378
            | |:..|..::::....| :.:.|.::|::..:...|  ....|||:||..: |:...::| |..
Yeast   313 A-LAPATFHKLEKEFNAP-VLEAYAMTEASHQMTSNNLPPGKRKPGTVGQPQ-GVTVVILD-DND 373

  Fly   379 KLLGANERGELCFKGDGIMKGYIGDTKSTQTAI--KDGWLHTGDIGYYDDDFEFFIVDRIKELIK 441
            .:|...:.||:..:|:.:..||..:.|:.:...  ::.:..|||.||:|.:....:..||||||.
Yeast   374 NVLPPGKVGEVSIRGENVTLGYANNPKANKENFTKRENYFRTGDQGYFDPEGFLVLTGRIKELIN 438

  Fly   442 YKGYQVPPAEIEALLLTNDKIKDAAVIGKPDEEAGELPLAFVVKQANVQLTENEVIQFVNDNAS- 505
            ..|.::.|.|::.::|::.||.:|...|.||:..|::..|.:|.:...::|..|::.|:..:.: 
Yeast   439 RGGEKISPIELDGIMLSHPKIDEAVAFGVPDDMYGQVVQAAIVLKKGEKMTYEELVNFLKKHLAS 503

  Fly   506 ---PAKRLRGGVIFVDEIPKNPSGKILRRILREMLKK---QKSKL 544
               |.|     |.|||::||..:|||.||::.|...|   .||||
Yeast   504 FKIPTK-----VYFVDKLPKTATGKIQRRVIAETFAKSSRNKSKL 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6178NP_651221.1 PLN02246 26..537 CDD:215137 132/488 (27%)
Firefly_Luc_like 43..529 CDD:213279 128/480 (27%)
PCS60NP_009781.3 FACL_fum10p_like 18..531 CDD:341249 131/486 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 116 1.000 Domainoid score I1304
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 188 1.000 Inparanoid score I924
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm46937
orthoMCL 1 0.900 - - OOG6_100107
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.760

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