DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6178 and AT4G05160

DIOPT Version :9

Sequence 1:NP_651221.1 Gene:CG6178 / 42867 FlyBaseID:FBgn0039156 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_192425.1 Gene:AT4G05160 / 825864 AraportID:AT4G05160 Length:544 Species:Arabidopsis thaliana


Alignment Length:547 Identity:197/547 - (36%)
Similarity:306/547 - (55%) Gaps:58/547 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 SLGQYILDKYKSFGDRTVLVDAVNGVEYSASFMHKSIVRLAYILQKLGVKQNDVVGLSSENSVNF 90
            ||..::.....|:..:..:.|:..|...:.|.:..::.|||:...:||:::||||.:.:.||..|
plant    28 SLVSFLFRNSSSYPSKLAIADSDTGDSLTFSQLKSAVARLAHGFHRLGIRKNDVVLIFAPNSYQF 92

  Fly    91 ALAMFAGLAVGATVAPLNVTYSDREVDHAINLSKPKIIFASKITIDRVAKVASKNKFVKG----I 151
            .|...|..|:|......|..|:..||...|..|.||||.:.....|:          :||    :
plant    93 PLCFLAVTAIGGVFTTANPLYTVNEVSKQIKDSNPKIIISVNQLFDK----------IKGFDLPV 147

  Fly   152 IALS---------GTSKK---FKNIYDLKELMEDEKFKTQPDFTSPAANKDEDVSLIVCSSGTTG 204
            :.|.         |::.|   |.|:.:|.|.:.:..|         ...|..|.:.::.||||||
plant   148 VLLGSKDTVEIPPGSNSKILSFDNVMELSEPVSEYPF---------VEIKQSDTAALLYSSGTTG 203

  Fly   205 LPKGVQLTQMN-----LLATLDSQIQPTVIPMEEV--TLLTVIPWFHAFGCLTLITTACV--GAR 260
            ..|||:||..|     |:.|:|..:      |.|.  ..|..:|.||.|| |.:||.:.:  |..
plant   204 TSKGVELTHGNFIAASLMVTMDQDL------MGEYHGVFLCFLPMFHVFG-LAVITYSQLQRGNA 261

  Fly   261 LVYLPKFEEKLFLSAIEKYRVMMAFMVPPLMVFLAKHPIVDKYDLSSLMVLLCGAAPLSRETEDQ 325
            ||.:.:||.:|.|..|||:||...::|||:.:.|:|..||.|:|||||..:..|||||.::..::
plant   262 LVSMARFELELVLKNIEKFRVTHLWVVPPVFLALSKQSIVKKFDLSSLKYIGSGAAPLGKDLMEE 326

  Fly   326 IKERIGVPFIRQGYGLSESTLSVLVQNDEFCK--PGSVGVLKVGIYAKVIDPDTGKLLGANERGE 388
            ....|....:.||||::|:...|.|::....|  .||.|:|..|:.|:::..:|||....|::||
plant   327 CGRNIPNVLLMQGYGMTETCGIVSVEDPRLGKRNSGSAGMLAPGVEAQIVSVETGKSQPPNQQGE 391

  Fly   389 LCFKGDGIMKGYIGDTKSTQTAI-KDGWLHTGDIGYYDDDFEFFIVDRIKELIKYKGYQVPPAEI 452
            :..:|..:||||:.:.::|:..| |..|:||||:||:::|...::||||||||||||:||.|||:
plant   392 IWVRGPNMMKGYLNNPQATKETIDKKSWVHTGDLGYFNEDGNLYVVDRIKELIKYKGFQVAPAEL 456

  Fly   453 EALLLTNDKIKDAAVIGKPDEEAGELPLAFVVKQANVQLTENEVIQFVNDNASPAKRLRGGVIFV 517
            |.||:::..|.||.||..|||||||:|:||||:..|..:||.::.:|:....:|.|||| .|.|:
plant   457 EGLLVSHPDILDAVVIPFPDEEAGEVPIAFVVRSPNSSITEQDIQKFIAKQVAPYKRLR-RVSFI 520

  Fly   518 DEIPKNPSGKILRRILREMLKKQKSKL 544
            ..:||:.:|||||   ||::::.:||:
plant   521 SLVPKSAAGKILR---RELVQQVRSKM 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6178NP_651221.1 PLN02246 26..537 CDD:215137 195/538 (36%)
Firefly_Luc_like 43..529 CDD:213279 187/513 (36%)
AT4G05160NP_192425.1 4CL 21..536 CDD:341230 194/537 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 244 1.000 Domainoid score I559
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 334 1.000 Inparanoid score I670
OMA 1 1.010 - - QHG54045
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 1 1.000 - - FOG0000951
OrthoInspector 1 1.000 - - otm2541
orthoMCL 1 0.900 - - OOG6_100107
Panther 1 1.100 - - O PTHR24096
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X154
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1211.880

Return to query results.
Submit another query.