DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6178 and dip2cb

DIOPT Version :9

Sequence 1:NP_651221.1 Gene:CG6178 / 42867 FlyBaseID:FBgn0039156 Length:544 Species:Drosophila melanogaster
Sequence 2:XP_005171457.1 Gene:dip2cb / 569986 ZFINID:ZDB-GENE-070912-589 Length:1595 Species:Danio rerio


Alignment Length:681 Identity:135/681 - (19%)
Similarity:234/681 - (34%) Gaps:217/681 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SKLLPGNIVYGGPVTERQAQDS-RSLG------QYI-LDKYKSFGDRT----VLVDAVN-----G 50
            :.::.||:|.|    :|.||.| |.|.      |:: |.:...:..:|    :|...:|     |
Zfish   968 ASVMVGNLVAG----KRMAQASGRDLSHMEDNEQFLFLSEMLQWRAQTTPEHILYTLINSRGAVG 1028

  Fly    51 VEYSASFMHKSIVRLAYILQKLG-VKQNDVVGLSSENSVNFALAMFAGLAVGA---TVA---PLN 108
            ...:...:||...::|.:|.:.| ::..|.|.|.....::...|.:..|..|.   ||.   |.|
Zfish  1029 SSLTCLQLHKRAEKIATLLYERGQLRDGDHVALVYPPGLDLIAAFYGCLYAGCIPITVRPPHPQN 1093

  Fly   109 VTYSDREVDHAINLSKPKIIFA----SKITIDRVAKVASKNKFVKGIIALSGTSKK-----FKNI 164
            ::.:...|...:.:|:...:..    ||:...|.|.||...|....|:......|:     ||  
Zfish  1094 ISTTLPTVKMILEVSRSVCVMTSQMISKLLKSRDASVAVDFKLWPPILETDDLPKRRCPLMFK-- 1156

  Fly   165 YDLKELMEDEKFKTQPDFTSPAANKDEDVSLIVCSSGTTGLPKGVQLTQMNLLATLDS-QIQPTV 228
                        ...||          .::.:..|..|||:..||:::.....|...| ::|..:
Zfish  1157 ------------PCDPD----------SLAYLDFSVSTTGMLAGVKMSHNATSALCRSVKLQCEL 1199

  Fly   229 IPMEEVTL-------LTVIPWFHAFGCLTLITTACVGARLVYLPKFE----EKLFLSAIEKYRVM 282
            .|..||.:       |..:.|     ||   .:...|.:.|.:...:    ..|:|.|:.:::|.
Zfish  1200 YPSREVAVCLDPYCGLGFVLW-----CL---CSVYAGQQSVLISPMDLEVNPALWLQAVSQFKVR 1256

  Fly   283 MAFMVPPLMVFLAKHPIVDKYDLSSL----------------MVLLCGAAPLSRETEDQIK---- 327
            ..|....:|....:       .||||                .|::....|....|:...|    
Zfish  1257 DTFCSYSVMELCTR-------SLSSLTDTLKARGMDLTRVRSCVVVAEERPRVALTQSFCKLFKD 1314

  Fly   328 ------------------------ERIGVPFIRQG-YGLSESTLSV---LVQND-----EFCKPG 359
                                    .|:| ....|| .|...:|:.|   .:::|     |...|.
Zfish  1315 VGLHPRAVSTAFGCRVNLAICLQPHRLG-KLAEQGTSGPDPTTVYVDMRALRHDRVRLVERGSPH 1378

  Fly   360 SV-----GVLKVGIYAKVIDPDTGKLLGANERGELCFKGDGIMKGY------------------- 400
            |:     |.:..|:...:.:|:|...:|.:..||:.........||                   
Zfish  1379 SLPLMESGKILPGVRIIIANPETKGPIGDSHLGEIWVHSPQNASGYFTVFGEENVRSDHFGARLS 1443

  Fly   401 IGDTKSTQTAIKDGWLHTGDIGYY------DDDFE----FFIVDRIKELIKYKGYQVPPAEIE-A 454
            .|||::.       |..||.:|:.      |...|    .::|..:.|:::.:|.:..|.:|| :
Zfish  1444 FGDTQTV-------WARTGYLGFLRRTDLTDASGERHDALYVVGALDEVMELRGMKYHPIDIETS 1501

  Fly   455 LLLTNDKIKDAAVI-------------GKPDEEAGELPLAFVVKQANVQLTENEVIQFVNDNASP 506
            ::..:..|.:.||.             |...|....:|:.     .||.|.|:.:|.        
Zfish  1502 IIRAHRNITECAVFTWTNLLVVVVELEGSEQEALDLVPMV-----TNVVLEEHYLIV-------- 1553

  Fly   507 AKRLRGGVIFVDE--IPKNPSGKILRRILRE 535
                 |.|:.||.  ||.|..|:..|..||:
Zfish  1554 -----GVVVVVDTGVIPINSRGEKQRMHLRD 1579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6178NP_651221.1 PLN02246 26..537 CDD:215137 126/657 (19%)
Firefly_Luc_like 43..529 CDD:213279 119/621 (19%)
dip2cbXP_005171457.1 DMAP_binding 6..114 CDD:283995
CaiC 349..940 CDD:223395
AFD_class_I 375..937 CDD:302604
AMP-binding 1005..1489 CDD:278902 97/530 (18%)
AFD_class_I 1022..1584 CDD:302604 121/623 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.