DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6178 and CG6300

DIOPT Version :9

Sequence 1:NP_651221.1 Gene:CG6178 / 42867 FlyBaseID:FBgn0039156 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_650828.1 Gene:CG6300 / 42351 FlyBaseID:FBgn0038730 Length:537 Species:Drosophila melanogaster


Alignment Length:536 Identity:147/536 - (27%)
Similarity:249/536 - (46%) Gaps:43/536 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VYGGPVTERQAQDSRSLGQYILDKYKSFGDRTVLVDAVNGVEYSASFMHKSIVRLAYILQKLGVK 75
            ::.|....:......|:|:.|..:.:.....|..:.|..|...:...:..:.:|||..::.||:.
  Fly    15 IWSGEPVVKYFDPDLSIGEIIFHEMRRHPQLTAQISATEGTVLTRGELLANAMRLASYMRSLGLL 79

  Fly    76 QNDVVGLSSENSVNFALAMFAGLAVGATVAPLNVTYSDREVDHAINLSKPKIIFASKITIDRVAK 140
            |:|:||:...|:.:.....:|....|.....||:||....::....:::|.|||......::| :
  Fly    80 QSDIVGIIGRNTTHMLAVAYACFFNGIAFHSLNITYDRDTIEKIYKVTRPSIIFCDGDEFEKV-R 143

  Fly   141 VASKNKFVKGIIALSGTSKKFKNIYDLKELMEDEKFKT--QPDFTSPAANKDEDVSL-IVCSSGT 202
            .|:....|| |:.:..        :.|..:..||...|  :.:|......|..|.:| |:|||||
  Fly   144 SATAELDVK-IVTMRN--------HPLDSIKIDEVVATPIEENFQPAKLEKGNDQTLAILCSSGT 199

  Fly   203 TGLPKGVQLT-QMNLLA------TLDSQIQPTVIPMEEVTLLTVIPWFHAFGCLTLITTACVG-A 259
            ||.||.|.:| ..::||      |.|.|...           ..:.|.  .|.||.||:.... .
  Fly   200 TGTPKAVTITNSRHILAGNYHLTTADVQYSH-----------NTLDWI--TGLLTTITSGVFSTT 251

  Fly   260 RLVYLPKFEEKLFLSAIEKYRVMMAFMVPPLMVFLAKHPIVDKYDLSSLMVLLCGAAPLSRETED 324
            |::....|:....|..||:|:|......|..|..:...|..:..|:|||...:.|.:..:.|.:.
  Fly   252 RIIADNAFDPAFALRIIEEYKVTWTIQPPSSMALMINCPDFETCDMSSLRCYMFGGSRAALEVQK 316

  Fly   325 QIKERIGVPFIRQGYGLSE--STLSVLVQNDEFCKPGSVGVLKVGIYAKVIDPDTGKLLGANERG 387
            .|:.|:....::..||.:|  :..::....||  |.||||.|..|:..|:|: |.|:.||.:|.|
  Fly   317 GIRSRLSHDCLQFVYGFTELGAMATINCHFDE--KTGSVGQLVNGLKMKIIN-DDGESLGPDEIG 378

  Fly   388 ELCFKGDGIMKGYIGDTKSTQTAIKD--GWLHTGDIGYYDDDFEFFIVDRIKELIKYKGYQVPPA 450
            |:|...:....||.|:...|:. ::|  ||.|:||:||.|.|...:|:||.||::||:.....|.
  Fly   379 EVCIMNNQHWSGYYGNEVETRN-MRDSLGWYHSGDLGYMDRDGFLYIMDRKKEMLKYQNIMYYPN 442

  Fly   451 EIEALLLTNDKIKDAAVIGKPDEEAGELPLAFVVKQANVQLTENEVIQFVNDNA-SPAKRLRGGV 514
            :||:::....::.:..|.|......|:...|.|||:...:|...:|:.:|.... |..|:|.||.
  Fly   443 DIESVISEMPQVAEVCVFGIWSNIFGDEAAAAVVKKLGSELEAQDVVDYVRSRTDSKYKQLNGGA 507

  Fly   515 IFVDEIPKNPSGKILR 530
            :.||::.::.:||..|
  Fly   508 VIVDDLQRSANGKTNR 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6178NP_651221.1 PLN02246 26..537 CDD:215137 146/521 (28%)
Firefly_Luc_like 43..529 CDD:213279 141/501 (28%)
CG6300NP_650828.1 CaiC 26..523 CDD:223395 145/523 (28%)
AFD_class_I 47..522 CDD:302604 141/501 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24096
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.920

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