DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6178 and Acsm2

DIOPT Version :9

Sequence 1:NP_651221.1 Gene:CG6178 / 42867 FlyBaseID:FBgn0039156 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_653349.1 Gene:Acsm2 / 246263 RGDID:708383 Length:572 Species:Rattus norvegicus


Alignment Length:494 Identity:129/494 - (26%)
Similarity:207/494 - (41%) Gaps:63/494 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 GVKQNDVVGLSSENSVNFALAMFAGLAVGATVAPLNVTYSDREVDHAINLSKPKIIFASKITIDR 137
            |:::.|.|.:.......:.|.....:..|....|........::.:.:..||.:.|.|....:..
  Rat   102 GLQRGDRVAVVLPRVPEWWLVTLGCMRSGLVFMPGTTQMKSTDILYRLQSSKARAIVAGDEVVQE 166

  Fly   138 VAKVASKNKFVKGIIALSGTSKKFKNIYDLKELMEDEKFKTQPDFTSPAANKDEDVS----LIVC 198
            |..||....|:|  |.|..:.|..:...:.|.|::|         .||.....|.||    .|..
  Rat   167 VDAVAPDCSFLK--IKLLVSEKNREGWLNFKALLKD---------ASPIHQCVETVSQESAAIYF 220

  Fly   199 SSGTTGLPKGVQLT--QMNLLATLD--------SQIQPTVIPMEEVTLLTVI-----PWFHAFGC 248
            :|||:|.||..:.:  .:.|.|.:|        |....|:  .:...:|.::     ||      
  Rat   221 TSGTSGPPKMAEHSHCSLGLKAKMDAGWTGLGPSDTMWTI--SDTGWILNILGSFLEPW------ 277

  Fly   249 LTLITTACVGARLVYLPKFEEKLFLSAIEKYRVMMAFMVPPLMVFLAKHPIVDKYDLSSLMVLLC 313
               :...|:...|  ||||:.:..|..:..|.: ...:..||:..:.....:..|....|.....
  Rat   278 ---VLGTCIFVHL--LPKFDPQTVLKVLSSYPI-NTLLGAPLIYRMLLQQDLSSYKFPHLHSCFS 336

  Fly   314 GAAPLSRETEDQIKERIGVPFIRQGYGLSESTLSVLVQNDEFCKPGSVGVLKVGIYAKVIDPDTG 378
            |...|..||.:..|.:.|:. ||:.||.:|:.::..|......|||.:|...|....:||| :.|
  Rat   337 GGETLLPETLESWKAKTGLE-IREIYGQTETGITCRVSRTMKVKPGYLGTAIVPYDVQVID-EQG 399

  Fly   379 KLLGANERGELCFKGD-----GIMKGYIGDTKSTQTAIK-DGWLHTGDIGYYDDDFEFFIVDRIK 437
            .:|...:.|::..:..     |:..||:.:.|.||..|: |.|| .||.|..|.:..|..:.|..
  Rat   400 NVLPPGKEGDMALRVKPIRPIGMFSGYVDNPKKTQANIRGDFWL-LGDRGIKDTEGYFHFMGRTD 463

  Fly   438 ELIKYKGYQVPPAEIEALLLTNDKIKDAAVIGKPDEEAGELPLAFVV------KQANVQLTENEV 496
            ::|...||::.|:|:|..|:.:..:.:.|||..||....|:..||||      .....|||  :|
  Rat   464 DIINSSGYRIGPSEVENALMEHPAVVETAVISSPDPIRREVVKAFVVLAPEFLSHDQDQLT--KV 526

  Fly   497 IQ-FVNDNASPAKRLRGGVIFVDEIPKNPSGKILRRILR 534
            :| .|....:|.|..| .|.||.::||..:|||.|..||
  Rat   527 LQEHVKSVTAPYKYPR-KVEFVLDLPKTITGKIERAKLR 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6178NP_651221.1 PLN02246 26..537 CDD:215137 129/494 (26%)
Firefly_Luc_like 43..529 CDD:213279 125/487 (26%)
Acsm2NP_653349.1 AFD_class_I 40..568 CDD:302604 129/494 (26%)
Acs 40..565 CDD:223442 129/494 (26%)
Coenzyme A binding. /evidence=ECO:0000250 469..471 0/1 (0%)
Coenzyme A binding. /evidence=ECO:0000250 540..542 0/1 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D333840at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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