DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6178 and Acsm4

DIOPT Version :9

Sequence 1:NP_651221.1 Gene:CG6178 / 42867 FlyBaseID:FBgn0039156 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_848501.1 Gene:Acsm4 / 233801 MGIID:2681844 Length:580 Species:Mus musculus


Alignment Length:565 Identity:147/565 - (26%)
Similarity:251/565 - (44%) Gaps:69/565 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KLLPGNIVYGGPVTERQAQDSRSLGQYILDKYKSFGDRTV--LVDAVNG----VEYSASFMHKSI 62
            |.||.|..:...|          |.|:.| |.|| |:|..  .:..|||    |::|...:....
Mouse    46 KPLPKNFNFAADV----------LDQWSL-KEKS-GERPANPALWWVNGKGDEVKWSFQELGSLS 98

  Fly    63 VRLAYILQK-LGVKQNDVVGLSSENSVNFALAMFAGLAVGATVAPLNVTYSDREVDHAINLSKPK 126
            .:.|.:|.| .|:::.|.|.:.......:.|...|.:..|....|..:..:.:::.:.:..||.|
Mouse    99 RKAANVLTKPCGLQRGDRVAVILPRIPEWWLINVACMRTGLVFMPGTIQLTRKDILYRLQASKAK 163

  Fly   127 IIFASKITIDRVAKVASKNKFVKGIIALS-----GTSKKFKNIYDLKELMEDEKFKTQPDFTSPA 186
            .|.||:.....|..:.|:...:|..:.:|     |    :.|..:|.:...:|....:.....|.
Mouse   164 CIVASEEVAPAVDSIVSECPSLKTKLLVSPHHWDG----WLNFQELLQSASEEHNCVETGSQEPM 224

  Fly   187 ANKDEDVSLIVCSSGTTGLPKGVQLTQ--MNLLATLDSQIQPTVIPMEEVTLLTVIPWFH-AFGC 248
            |        |..:|||||.||..|.:|  :.:..||..:....:...:.:..::...|.. |.|.
Mouse   225 A--------IYFTSGTTGSPKMAQHSQGSLGIGYTLCGRYWLDLTSSDIMWNMSDTGWIKAAIGS 281

  Fly   249 L--TLITTACVGARLVY-LPKFEEKLFLSAIEKYRVMMAFMVPPLMVFLAKHPIVDKYDLSSLMV 310
            :  |.:..|||   .|: :.:|:..:||..:..|.:......|.:...|.:..: .:|....|..
Mouse   282 VFSTWLRGACV---FVHRMAQFDTDIFLDTLTTYPITTLCSAPTVYRMLVQKDL-KRYQFKRLRH 342

  Fly   311 LLCGAAPLSRETEDQIKERIGVPFIRQGYGLSESTLSVLVQNDEFCKPGSVGVLKVGIYAKVIDP 375
            .|.|..||:.|..:|.|.:.|:. :.:|||.:|..:....:..|..||||:|...|....::|| 
Mouse   343 CLTGGEPLNPEVLEQWKMQTGLE-LYEGYGQTEVGIICANRKGEAIKPGSMGKGVVPYDVQIID- 405

  Fly   376 DTGKLLGANERGEL----------CFKGDGIMKGYIGDTKSTQTAIKDGWLHTGDIGYYDDDFEF 430
            :.|.:|.:.:.||:          ||..:     |:.:.:.|...|:..:..|||.|..|||..|
Mouse   406 ENGNILPSGKEGEIALRLKSDRPFCFFSE-----YVDNPEKTDATIRRNFYVTGDRGVMDDDGYF 465

  Fly   431 FIVDRIKELIKYKGYQVPPAEIEALLLTNDKIKDAAVIGKPDEEAGELPLAFVV-----KQANVQ 490
            :.|.|..::|...||::.|.|:|:.|:.:..:.::||:..||...||:..||:|     |.:|.:
Mouse   466 WFVGRADDVIISSGYRIGPFEVESALIEHPAVVESAVVSSPDPIRGEVVKAFIVLAAPYKCSNRE 530

  Fly   491 LTENEVIQFVNDNASPAKRLRGGVIFVDEIPKNPSGKILRRILRE 535
            ....|:...|.::.:|.|..| .|.||.|:||..:|||.|.:||:
Mouse   531 KLTAELQDHVKNSTAPYKYPR-KVEFVQELPKTITGKIKRNVLRD 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6178NP_651221.1 PLN02246 26..537 CDD:215137 142/543 (26%)
Firefly_Luc_like 43..529 CDD:213279 130/518 (25%)
Acsm4NP_848501.1 MACS_euk 48..577 CDD:213294 146/563 (26%)
Acs 49..576 CDD:223442 145/562 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D333840at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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