DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6178 and Acsm3

DIOPT Version :9

Sequence 1:NP_651221.1 Gene:CG6178 / 42867 FlyBaseID:FBgn0039156 Length:544 Species:Drosophila melanogaster
Sequence 2:XP_017177549.1 Gene:Acsm3 / 20216 MGIID:99538 Length:593 Species:Mus musculus


Alignment Length:495 Identity:121/495 - (24%)
Similarity:213/495 - (43%) Gaps:63/495 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 NGVEYSASFMHKSIV--RLAYIL-QKLGVKQNDVVGLSSENSVNFALAMFAGLAVGATVAPLNVT 110
            ||.|...||....::  :.|.|| :...:::.|.|.:.......:.||..|.|..|..:.|....
Mouse    83 NGEELRWSFEELGLLSRKFANILTEACSLQRGDRVMVILPKIPEWWLANVACLRTGTVLIPGTTQ 147

  Fly   111 YSDREVDHAINLSKPKIIFASKITIDRVAKVASKNKFVKGIIALSGTSKKFKNIYDLKELMEDEK 175
            .:.:::.:.:..||.|.|.........|..||:|.:.:...:.:|..|:  :...:|||:|    
Mouse   148 LTQKDILYRLQSSKAKCIITDDTLAPAVDAVAAKCENLHSKLIVSQHSR--EGWGNLKEMM---- 206

  Fly   176 FKTQPDFTSPAANKDEDVSLIVCSSGTTGLPKGVQLTQ--------------MNLLATLDSQIQP 226
             |...|..:....|.:::..|..:|||||.||.:..|.              ::|:|:       
Mouse   207 -KYASDSHTCVDTKHDEMMAIYFTSGTTGPPKMIGHTHSSFGLGLSVNGRFWLDLIAS------- 263

  Fly   227 TVIPMEEVTLLTVIPWFHAFGCLTLITTACVGARLVYLPKFEEKLFLSAIEKYRVMMAFMVPPLM 291
            .|:.....|......|...|...|  ..|||.|.  |||:||....|..:.|:.:.:....|...
Mouse   264 DVMWNTSDTGWAKSAWSSVFSPWT--QGACVFAH--YLPRFESTSILQTLSKFPITVFCSAPTAY 324

  Fly   292 VFLAKHPIVDKYDLSSLMVLLCGAAPLSRETEDQIKERIGVPFIRQGYGLSESTLSVLVQNDEFC 356
            ..|.::.:...|..:||...:....|::.|..:|.:::.|:. |.:|||.:|:.|        .|
Mouse   325 RMLVQNDMSRSYKFNSLKHCVSAGEPINPEVMEQWRKKTGLD-IYEGYGQTETVL--------IC 380

  Fly   357 --------KPGSVGVLKVGIYAKVIDPDTGKLLGANERGELCF-----KGDGIMKGYIGDTKSTQ 408
                    ||||:|........|::| :.|..|...:.|::..     :..|:...|:.:...|.
Mouse   381 GNFKGMKIKPGSMGKPSPAFDVKILD-ENGATLPPGQEGDIALQVLPERPFGLFTHYVDNPSKTA 444

  Fly   409 TAIKDGWLHTGDIGYYDDDFEFFIVDRIKELIKYKGYQVPPAEIEALLLTNDKIKDAAVIGKPDE 473
            :.::..:..|||.||.|:|..|:.|.|..::|...||::.|.|:|:.|:.:..|.::||:..||.
Mouse   445 STLRGSFYITGDRGYMDEDGYFWFVARSDDIILSSGYRIGPFEVESALIEHPSIAESAVVSSPDP 509

  Fly   474 EAGELPLAFVV-----KQANVQLTENEVIQFVNDNASPAK 508
            ..||:..||:|     |..:.:..:.|:.:.|....:|.|
Mouse   510 IRGEVVKAFIVLNPDYKSHDQEQLKKEIQEHVKKTTAPYK 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6178NP_651221.1 PLN02246 26..537 CDD:215137 121/495 (24%)
Firefly_Luc_like 43..529 CDD:213279 121/495 (24%)
Acsm3XP_017177549.1 AFD_class_I 48..554 CDD:388389 121/495 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3623
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D333840at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.960

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