DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6178 and acs-1

DIOPT Version :9

Sequence 1:NP_651221.1 Gene:CG6178 / 42867 FlyBaseID:FBgn0039156 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_001023937.1 Gene:acs-1 / 179043 WormBaseID:WBGene00018488 Length:623 Species:Caenorhabditis elegans


Alignment Length:554 Identity:139/554 - (25%)
Similarity:232/554 - (41%) Gaps:81/554 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 DRTVLVDAVNGVEYSASFMHKSIVRLAYILQKLGVKQNDVVGLSSENSVNFALAMFAGLAVGATV 104
            |:..|:....|:..:.|.:......||..|..||:|:.|.:|:...|:..:....||....|..:
 Worm    81 DKEFLIFKREGIRKTYSQVATDAENLACGLLHLGLKKGDRIGIWGPNTYEWTTTQFASALAGMVL 145

  Fly   105 APLNVTYSDREVDHAINLSKPKIIFASKIT-------------IDRVAKVASKNKFVKGIIALSG 156
            ..:|.:|...|:.:||.    |:...:.||             .|.:.:|..|.....||     
 Worm   146 VNINPSYQSEELRYAIE----KVGIRALITPPGFKKSNYYQSIKDILPEVTLKEPGKSGI----- 201

  Fly   157 TSKKFKNIYDLKELMEDEKFKTQP------DFTSPAANKDE------------DVSL-IVCSSGT 202
            ||:.|.....|  :|.||:.|..|      |.......:|.            |.|| |..:|||
 Worm   202 TSRNFTCFQHL--IMFDEEDKIYPGAWKYTDVMKMGTEEDRHHLSKIERETQPDDSLNIQYTSGT 264

  Fly   203 TGLPKGVQLTQMNLL-----ATLDSQIQPTVIPMEEVTLLTV-IPWFHAFGCLTLITTACVGARL 261
            ||.|||..||..|:|     ..|.:...      |:.|::.: .|.:|.|||:..:..|     |
 Worm   265 TGQPKGATLTHHNVLNNAFFVGLRAGYS------EKKTIICIPNPLYHCFGCVMGVLAA-----L 318

  Fly   262 VYL-------PKFEEKLFLSAIEKYRVMMAFMVPPLMVFLAKHPIVDKYDLSSLMVLLCGAAPLS 319
            .:|       |.|:....|.||.:.:....:..|.:.:.:..||....|:..|:.......||..
 Worm   319 THLQTCVFPAPSFDALAALQAIHEEKCTALYGTPTMFIDMINHPEYANYNYDSIRSGFIAGAPCP 383

  Fly   320 RETEDQIKERIGVPFIRQGYGLSE-STLSVLVQNDEFCKP----GSVGVLKVGIYAKVIDPDTGK 379
            .....::.:.:.:..::..||.:| |.:|.:...|:  .|    .|||.:...:.|.::| ....
 Worm   384 ITLCRRLVQDMHMTDMQVCYGTTETSPVSFMSTRDD--PPEQRIKSVGHIMDHLEAAIVD-KRNC 445

  Fly   380 LLGANERGELCFKGDGIMKGYIGDTKSTQTAI-KDGWLHTGDIGYYDDDFEFFIVDRIKELIKYK 443
            ::....:||:..:|..:|:.|....:.|:..| :|.|.|||||....|:....||.|.|::|...
 Worm   446 IVPRGVKGEVIVRGYSVMRCYWNSEEQTKKEITQDRWYHTGDIAVMHDNGTISIVGRSKDMIVRG 510

  Fly   444 GYQVPPAEIEALLLTNDKIKDAAVIGKPDEEAGELPLAFV--VKQANVQLTENEVIQFVNDNASP 506
            |..:.|.|:|..|..:..::|..::|.|||..||:..|:|  .:.|..:.||.::..:.....:.
 Worm   511 GENIYPTEVEQFLFKHQSVEDVHIVGVPDERFGEVVCAWVRLHESAEGKTTEEDIKAWCKGKIAH 575

  Fly   507 AKRLRGGVIFVD--EIPKNPSGKILRRILREMLK 538
            .|..| .::|..  |.|...:||:.:..:|||.|
 Worm   576 FKIPR-YILFKKEYEFPLTVTGKVKKFEIREMSK 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6178NP_651221.1 PLN02246 26..537 CDD:215137 137/551 (25%)
Firefly_Luc_like 43..529 CDD:213279 134/540 (25%)
acs-1NP_001023937.1 PRK08315 53..615 CDD:236236 139/554 (25%)
FACL_like_2 252..604 CDD:213284 95/366 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100107
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X154
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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