DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6178 and acs-6

DIOPT Version :9

Sequence 1:NP_651221.1 Gene:CG6178 / 42867 FlyBaseID:FBgn0039156 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_495450.1 Gene:acs-6 / 174156 WormBaseID:WBGene00022849 Length:565 Species:Caenorhabditis elegans


Alignment Length:507 Identity:171/507 - (33%)
Similarity:265/507 - (52%) Gaps:50/507 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 LAYILQKLGVKQNDVVGLSSENSVNFALAMFAGLAVGATVAPLNVTYSDREVDHAINLSKPKIIF 129
            ||..|.|||.|..||...:..|...|.:||.|.:..|..::..:..::|.|:......|...|:|
 Worm    60 LATALVKLGFKPGDVASQAFPNCPEFLVAMLAVMKCGGAMSNASAIFTDYELQLQFCDSNTSIVF 124

  Fly   130 ASKITIDRVAKVASKNKFVKGIIALSGTSKKF-------KNIYDLKELMEDEKFKTQPDFTSPAA 187
            ..:..:.|:.:..:|...|:.||.|    :.|       :|:.|..||.:      .||......
 Worm   125 TDEDRLARIRRATAKCPGVRKIICL----RTFPLRTEFPENVLDYVELTQ------TPDQPINVN 179

  Fly   188 NKDEDVSLIVCSSGTTGLPKGVQLTQMNLLATLD-------SQIQPTVIPMEEVT-----LLTVI 240
            ...:.::|:..||||||.|||.|||..|:.|.||       :.:.|.:...|:.|     .:.::
 Worm   180 VSMDSIALLPYSSGTTGRPKGCQLTHRNIGAMLDVAKAHLETDVAPAMFGKEKATWHKEHTVLLL 244

  Fly   241 PWFHAFGCLTLITTACVGARLVYLPKFEEKLFLSAIEKYRVMMAFMVPPLMVFLAKHPIVDKYDL 305
            ||:||:|..|:..|..:|...:...||:..:.|:.|:.|:|.:|::|||:::||||.|:|..::.
 Worm   245 PWYHAYGLNTMFETILLGMTGIVFKKFDTIVMLNRIKFYKVKLAWLVPPMLIFLAKDPMVPIFNT 309

  Fly   306 SS-LMVLLCGAAPLSRETEDQIKERIGVPFIRQGYGLSESTLSVLVQ-------NDEFCKPGSVG 362
            :. |.|::...|...::..:::.:|....::.|.||::|     :||       .|..|.. :||
 Worm   310 APFLKVIMSAGATAGKQLCEEVSKRFPNAWLCQAYGMTE-----MVQFTTIPRFEDGNCFE-TVG 368

  Fly   363 VLKVGIYAKVIDPDTGKLLGANERGELCFKGDGIMKGYIGDTKSTQTAI--KDGWLHTGDIGYYD 425
            .|......|::|.:..::...|..|:|||:|..:||||:   |..:..|  |||:|.|||:|..|
 Worm   369 NLASTYELKILDKEKKEITTINTVGQLCFRGPTVMKGYL---KREEADIIDKDGFLLTGDLGSID 430

  Fly   426 DDFEFFIVDRIKELIKYKGYQVPPAEIEALLLTNDKIKDAAVIGKPDEEAGELPLAFVVKQANVQ 490
            |.....:..|||||||..|.||||.|||.:||.:.|:||.||||.|||..||.|.|::||:.:. 
 Worm   431 DKGRIHVTGRIKELIKVNGMQVPPVEIEDVLLLHPKVKDCAVIGVPDEHKGESPKAYIVKKDHT- 494

  Fly   491 LTENEVIQFVNDNASPAKRLRGGVIFVDEIPKNPSGKILRRILREMLKKQKS 542
            |||.|:.:||....|..|.: ....|:|.|||.|||||.|:.|::|.:...|
 Worm   495 LTEAELTEFVRQKLSSYKWI-DTYEFIDSIPKLPSGKIQRKKLKKMAESSGS 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6178NP_651221.1 PLN02246 26..537 CDD:215137 169/500 (34%)
Firefly_Luc_like 43..529 CDD:213279 166/492 (34%)
acs-6NP_495450.1 CaiC 15..541 CDD:223395 170/501 (34%)
Firefly_Luc_like 37..532 CDD:213279 166/492 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 198 1.000 Domainoid score I1795
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 303 1.000 Inparanoid score I1604
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54045
OrthoDB 1 1.010 - - D333840at33208
OrthoFinder 1 1.000 - - FOG0000951
OrthoInspector 1 1.000 - - otm14606
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24096
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X154
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.980

Return to query results.
Submit another query.