DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6178 and acsm3

DIOPT Version :9

Sequence 1:NP_651221.1 Gene:CG6178 / 42867 FlyBaseID:FBgn0039156 Length:544 Species:Drosophila melanogaster
Sequence 2:XP_002932029.3 Gene:acsm3 / 100491087 XenbaseID:XB-GENE-486978 Length:581 Species:Xenopus tropicalis


Alignment Length:514 Identity:124/514 - (24%)
Similarity:215/514 - (41%) Gaps:70/514 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 SIVRLAYILQKLGVKQNDVVGLSSENSV--------NFALAMFAGLAVGATVAPLNVTYSDREVD 117
            |...|.::.:|.....:|...|...:.|        .:.|...|.:..|..:.|.....:.:::.
 Frog    91 SFEELGFLSRKAANVLSDACNLKPGDRVIVILPRVPEWWLLNVACIRAGVVLIPGTTQLTAKDIL 155

  Fly   118 HAINLSKPKIIFASKITIDRVAKVASKNKFVKGIIALSGTSKKFKNIYDLKELMEDEKFKTQPDF 182
            |.:..|..|.|..|...::.|..||:::.|::..:.:|  :::.....|.|.|     |:...|.
 Frog   156 HRLQTSMAKCIITSDCLVEAVDSVAAQSPFLQTKMLIS--TERRDGWLDFKGL-----FQVANDK 213

  Fly   183 TSPAANKDEDVSLIVCSSGTTGLPK---------GVQLTQMNLLATLDSQIQPTVIP-------- 230
            .:....|..|...|..:|||||.||         |:.| ::|....:|  :.||.|.        
 Frog   214 HTCVKTKSSDPMTIFFTSGTTGSPKMTEHSHCSYGLGL-KVNGKYWMD--LTPTDIVWNMSDTGW 275

  Fly   231 MEEVTLLTVIPWFHAFGCLTLITTACVGARLVYLPKFEEKLFLSAIEKYRVMMAFMVPPLMVFLA 295
            .:........||         |..:||.|.  .:|:|:..:.|..:..:.:......|.....|.
 Frog   276 AKSAWSSVFAPW---------IQGSCVFAH--SMPRFDTNIVLKTLSTFPITTFCSAPTAYRMLV 329

  Fly   296 KHPIVDKYDLSSLMVLLCGAAPLSRETEDQIKERIGVPFIRQGYGLSESTLSVLVQNDEFCKPGS 360
            ..... .|...||...:....|::.:..:|.||:.|:. |.:|||.:|:.|..........||||
 Frog   330 LQNFA-SYKFKSLQHCVSAGEPINPQVMEQWKEQTGLD-IYEGYGQTETVLICGTFKGMKIKPGS 392

  Fly   361 VGVLKVGIYAKVIDPDTGKLLGANERGELCF-----KGDGIMKGYIGDTKSTQTAIKDGWLHTGD 420
            :|........:::| :.|.:|...:.|::..     |...:...|.||.:.|.:..:..:..|||
 Frog   393 MGKPSPAYDVEIVD-ENGNVLPQGKEGDIAIRILPQKPFCLFSQYTGDPERTASTRRGNFYLTGD 456

  Fly   421 IGYYDDDFEFFIVDRIKELIKYKGYQVPPAEIEALLLTNDKIKDAAVIGKPDEEAGELPLAFVV- 484
            .|..|:|..|:.|.|..::|...||::.|.|:|:.|:.:..:.::||:..||...||:..|||| 
 Frog   457 RGIKDEDGYFWFVGRSDDVILSSGYRIGPFEVESALIEHPAVAESAVVSSPDPIRGEVVKAFVVL 521

  Fly   485 ---------KQANVQLTENEVIQFVNDNASPAKRLRGGVIFVDEIPKNPSGKILRRILR 534
                     ::..::|.|:     |.:..:|.|..| .:.||.::||..||||.|..||
 Frog   522 APAYNGYDPEKLALELQEH-----VRNITAPYKYPR-KIEFVQQLPKTVSGKIRRNELR 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6178NP_651221.1 PLN02246 26..537 CDD:215137 124/514 (24%)
Firefly_Luc_like 43..529 CDD:213279 120/507 (24%)
acsm3XP_002932029.3 MACS_euk 49..578 CDD:341251 124/514 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D333840at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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