DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6178 and acsf3

DIOPT Version :9

Sequence 1:NP_651221.1 Gene:CG6178 / 42867 FlyBaseID:FBgn0039156 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_001121382.2 Gene:acsf3 / 100158470 XenbaseID:XB-GENE-964811 Length:589 Species:Xenopus tropicalis


Alignment Length:551 Identity:138/551 - (25%)
Similarity:237/551 - (43%) Gaps:88/551 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 FGDRTVLVDAVNGVEYSASFMHKSIVRLAYILQKLG--VKQN--DVVGLSSENSVNFALAMFAGL 98
            |.:||.:||......|...:: :|......|:|.||  .:.|  :.|.....|:.::.:..:|..
 Frog    65 FSERTAMVDQHGKHTYKELYI-RSQALSKMIIQLLGHPSRNNPPERVSFLCPNNSSYVVCQWAVW 128

  Fly    99 AVGATVAPLNVTYSDREVDHAINLSKPKIIFASKITIDRVAKVASKNKFVKGI--IALSGTSKKF 161
            ..||...||..::...|:.:.:..|:..::.|.    :..|.|.:......||  :.:||:    
 Frog   129 MSGAIAVPLYKSHPPSELKYILQDSQSALVVAE----ESYANVMNPLAEQLGIPVLTMSGS---- 185

  Fly   162 KNIYDLKELMEDEKFKTQPDFTSPAANKDEDVSLIVCSSGTTGLPKGVQLTQMNLLATLDSQIQP 226
            ::::..:.|.|.|..|.:.|:      ||.. ::|:.:|||||.||||..|..||.:.:.:.:..
 Frog   186 QSLHPSELLQEIEVSKLELDW------KDRG-AMIIYTSGTTGRPKGVLSTHYNLYSMVSALVTE 243

  Fly   227 TVIPMEEVTLLTVIPWFHAFGCLT-LITTACVGARLVYLPKFEEKLFLSAIEKYRVMMAFM---V 287
            .....|: ::|.|:|..|..|.:. |:....|||..|.||.|..:         :|...|:   .
 Frog   244 WGWTKED-SILHVLPLHHVHGVVNKLMCPLWVGATCVMLPDFCPQ---------KVWQHFLRRDA 298

  Fly   288 PPLMVFLAKHPIVDK----YD----------------LSSLMVLLCGAAPLSRETEDQIKERIGV 332
            |.:.:|:|...|..|    |:                ...:.:::.|::.|.....::.:|..|.
 Frog   299 PSINIFMAVPTIYSKLISYYEQHFTHSNVREFVRAACQERIRLMVSGSSALPVPILERWQEITGH 363

  Fly   333 PFIRQGYGLSESTLSVLVQNDEFCKPGSVGVLKVGIYAKVIDPD----------------TGKLL 381
            ..:.: ||::|..:::.........||:||....|:..:.:..:                ||.::
 Frog   364 TLLER-YGMTEIGMALTNPLHGPRVPGAVGNPLPGVEVRTVTQNPRKEGTSYTVHAHGDSTGTMV 427

  Fly   382 GA---NERGELCFKGDGIMKGYIGDTKSTQTAI-KDGWLHTGDIGYYDDDFEFFIVDRIK-ELIK 441
            ..   |..|||..:|..:.|.|......||.|. .|||..|||...|.|. .::|:.|.. ::||
 Frog   428 SVGLENREGELQVQGPAVFKEYWNKPHETQEAFTSDGWFKTGDTAVYKDG-TYWILGRTSVDIIK 491

  Fly   442 YKGYQVPPAEIEALLLTNDKIKDAAVIGKPDEEAGELPLAFVVKQANVQLTENEVIQFVN----D 502
            ..||:|...|:|..||.:..|.|.||||.||...|:...|.|..:....|:..|:.::..    .
 Frog   492 SGGYKVSALEVERHLLGHPSITDVAVIGAPDVTWGQRVAAIVKLRDGHALSLQELKEWARAVMAP 556

  Fly   503 NASPAKRLRGGVIFVDEIPKNPSGKILRRIL 533
            ...||:.:|     |:|||:|..|||.::.|
 Frog   557 YCIPAELIR-----VEEIPRNQMGKINKKQL 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6178NP_651221.1 PLN02246 26..537 CDD:215137 138/551 (25%)
Firefly_Luc_like 43..529 CDD:213279 133/540 (25%)
acsf3NP_001121382.2 CaiC 61..582 CDD:223395 137/549 (25%)
MCS 67..579 CDD:213307 136/544 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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