DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6178 and acsm3

DIOPT Version :9

Sequence 1:NP_651221.1 Gene:CG6178 / 42867 FlyBaseID:FBgn0039156 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_001104706.1 Gene:acsm3 / 100002035 ZFINID:ZDB-GENE-080220-22 Length:591 Species:Danio rerio


Alignment Length:555 Identity:140/555 - (25%)
Similarity:233/555 - (41%) Gaps:81/555 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 ILDKYKS---FGDRTVLVDA--VN--GVEYSASF----MHKSIVRLAYILQKL-GVKQNDVVGLS 83
            :|:|:::   .|.|:.|...  ||  |.|...||    .|..  :||.:|::: .:::.|.|.|.
Zfish    67 VLEKWETKEKSGQRSSLPALWWVNDHGTEVRWSFEELGFHSR--KLANVLRQVCSLERGDRVFLI 129

  Fly    84 SENSVNFALAMFAGLAVGATVAPLNVTYSDREVDHAINLSKPKIIFASKITIDRVAKVASKNKFV 148
            ......:.|...|.:..|..:.|.....:.|::.|.:..|..|.:...:.....:..||.....:
Zfish   130 LPRVPEWWLVNVACIRTGTVLIPGTSQLTARDMRHRLITSGAKCVITDETLAPLLDTVALDCPSI 194

  Fly   149 KGIIALSGTSKKFKNIYDLKELMEDEKFKTQPDFTSPAANKDEDVSLIVCSSGTTGLPK------ 207
            ...:.||  .|......:|.|||.    :...|......:.:|.:: |..:|||||.||      
Zfish   195 STKLLLS--HKPMDGWGNLTELMG----RVSDDHVCVDTSSEEPMT-IFFTSGTTGSPKMTQHSH 252

  Fly   208 ---GVQLTQMNLLATLDSQIQPTVIPMEEVTLLT-------------VIPWFHAFGCLTLITTAC 256
               |:.|| :|....||       :..::|...|             ..||         |..||
Zfish   253 CSYGLGLT-VNGRYWLD-------LTEQDVFWNTSDTGWAKSAWSSVFAPW---------IQGAC 300

  Fly   257 VGARLVYLPKFEEKLFLSAIEKYRVMMAFMVPPLMVFLAKHPIVDKYDLSSLMVLLCGAAPLSRE 321
            |...  ::|:|:....|..:..|.: ..|...|....:.....:.||...:|...||...|::.|
Zfish   301 VFVH--HMPRFDTNTVLKTLSHYPI-TTFCTAPTAYRMLVQDDLSKYKFQALEHCLCAGEPINPE 362

  Fly   322 TEDQIKERIGVPFIRQGYGLSESTLSVLVQNDEFCKPGSVGVLKVGIYAKVIDPDTGKLLGANER 386
            ...:.||..|:. |.:|||.:|:.|..........||||.|....|...:|:| :.|.::...:.
Zfish   363 VMCKWKELTGLD-IYEGYGQTETVLIAGTFKGMKIKPGSFGKASPGYDVQVVD-ENGSVVPKGQE 425

  Fly   387 GELCFKGD-----GIMKGYIGDTKSTQTAIKDGWLHTGDIGYYDDDFEFFIVDRIKELIKYKGYQ 446
            |:|..:..     .:...|.|:...|....:..:..|||.|..||:...:.:.|..::|...||:
Zfish   426 GDLGIRVKPERPFSLFTEYTGEPVRTAECFRGDFYLTGDRGMMDDEGYLWFIGRSDDVILSAGYR 490

  Fly   447 VPPAEIEALLLTNDKIKDAAVIGKPDEEAGELPLAFVV------KQANVQLTENEVIQFVNDNAS 505
            :.|.|:|..|:.:..:.::||:..||...||:..||||      .:|:.:|.: |:...|....:
Zfish   491 IGPFEVENALIEHPAVAESAVVSSPDPVRGEVVKAFVVLTADFKSRAHKELIK-ELQTHVKSITA 554

  Fly   506 PAKRLRGGVIFVDEIPKNPSGKILRRILREMLKKQ 540
            |.|..| .:.|||::||..|||| ||:  |:.||:
Zfish   555 PYKYPR-KIEFVDQLPKTVSGKI-RRV--ELRKKE 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6178NP_651221.1 PLN02246 26..537 CDD:215137 138/550 (25%)
Firefly_Luc_like 43..529 CDD:213279 130/527 (25%)
acsm3NP_001104706.1 Acs 54..583 CDD:223442 138/551 (25%)
AFD_class_I 57..586 CDD:302604 140/555 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D333840at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X154
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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