DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment p38a and cdk5

DIOPT Version :10

Sequence 1:NP_477163.1 Gene:p38a / 42866 FlyBaseID:FBgn0015765 Length:366 Species:Drosophila melanogaster
Sequence 2:NP_571794.1 Gene:cdk5 / 65234 ZFINID:ZDB-GENE-010131-2 Length:292 Species:Danio rerio


Alignment Length:307 Identity:107/307 - (34%)
Similarity:155/307 - (50%) Gaps:31/307 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 YQDLQPVGSGAYGQVSKAVVRGTNMHVAIKKLARPFQSAVHAKRTYRELRLLKHMDHENVIGLLD 89
            |:.|:.:|.|.||.|.||..|.|:..||:|::..............||:.|||.:.|:|::.|.|
Zfish     4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68

  Fly    90 IFHPHPANGSLENFQQVYLVTHLMDADLNNIIRMQH--LSDDHVQFLVYQILRGLKYIHSAGVIH 152
            :.|         :.:::.||....|.||.......:  |..:.|:..:||:|:||.:.||..|:|
Zfish    69 VLH---------SDKKLTLVFEYCDQDLKKYFDSCNGDLDPEIVKSFMYQLLKGLAFCHSRNVLH 124

  Fly   153 RDLKPSNIAVNEDCELRILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYDQTVDIWSVG 214
            |||||.|:.:|.:.||::.||||||.....:..|   |.|.|||.|:::.....|..::|:||.|
Zfish   125 RDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAG 189

  Fly   215 CIMAELITR-RTLFPGTDHIHQLNLIMEMLGTPPAEFLKKISSESARSYIQSLPPMK-------G 271
            ||.|||... |.||||.|...||..|..:||||         :|.....:..||..|       .
Zfish   190 CIFAELANAGRPLFPGNDVDDQLKRIFRLLGTP---------TEEQWQTMNKLPDYKPYPMYPAT 245

  Fly   272 RSFKNVFKNANPLAIDLLEKMLELDAEKRITAEEALSHPYLEKYAEP 318
            .|..||....:....|||:.:|:.:..:||:|||||.|||...:..|
Zfish   246 TSLVNVVPKLSSTGRDLLQNLLKCNPVQRISAEEALQHPYFADFCPP 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p38aNP_477163.1 STKc_p38 9..354 CDD:143356 107/307 (35%)
cdk5NP_571794.1 STKc_CDK5 3..286 CDD:143344 105/299 (35%)

Return to query results.
Submit another query.